RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 L3MBTL4Q8NA19 623 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 GOLM1Q8NBJ4 401 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 NUBPLQ8TB37 319 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 FAM57AQ8TBR7 257 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 SLC2A12Q8TD20 617 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 SLC44A1Q8WWI5 657 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 ZNF592Q92610 1267 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 SENP5Q96HI0 755 aaPredicted RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 SCYL1Q96KG9 808 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 C16orf45Q96MC5 204 aaPredicted RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 GPR78Q96P69 363 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 MTERF1Q99551 399 aaKnown RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 SERPINI1Q99574 410 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 DDX31Q9H8H2 851 aaKnown RBP8.69□□□□□ -1.02
YBX3-218ENST00000546298 SACM1LQ9NTJ5 587 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 AHSPQ9NZD4 102 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 SCN3AQ9NY46 2000 aa8.69□□□□□ -1.02
YBX3-218ENST00000546298 DIDO1Q9BTC0 2240 aaKnown RBP8.68□□□□□ -1.02
YBX3-218ENST00000546298 IQANK1A0A1B0GTG1 560 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 A0A1B0GTH9 108 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 STX16-NPEPL1H3BU86 382 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 PLPP1O14494 284 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 STX16O14662 325 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 PROM1O43490 865 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 HS6ST1O60243 411 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 OR10H2O60403 315 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 CDC40O60508 579 aaKnown RBP eCLIP8.68□□□□□ -1.02
YBX3-218ENST00000546298 SMIM24O75264 130 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 OR6B1O95007 311 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 ETHE1O95571 254 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 ACSL3O95573 720 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 GPR75O95800 540 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 P04436 131 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 TPOP07202 933 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 ALOX15P16050 662 aaPredicted RBP8.68□□□□□ -1.02
YBX3-218ENST00000546298 PTGER1P34995 402 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 RFC3P40938 356 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 CCNG1P51959 295 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 PPIAP62937 165 aaKnown RBP8.68□□□□□ -1.02
YBX3-218ENST00000546298 HSF1Q00613 529 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 TNFRSF17Q02223 184 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 ID2Q02363 134 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 FOLH1Q04609 750 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 CMPK2Q5EBM0 449 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 PIGGQ5H8A4 983 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 TECRLQ5HYJ1 363 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 TTC19Q6DKK2 380 aaPredicted RBP8.68□□□□□ -1.02
YBX3-218ENST00000546298 CYP20A1Q6UW02 462 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 C16orf47Q6ZP98 133 aaPredicted RBP8.68□□□□□ -1.02
YBX3-218ENST00000546298 NUDT13Q86X67 352 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 MCEMP1Q8IX19 187 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 OR4N5Q8IXE1 308 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 DND1Q8IYX4 353 aaKnown RBP8.68□□□□□ -1.02
YBX3-218ENST00000546298 ST13P4Q8IZP2 240 aaPredicted RBP8.68□□□□□ -1.02
YBX3-218ENST00000546298 SLC15A4Q8N697 577 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 PTGR2Q8N8N7 351 aaPredicted RBP8.68□□□□□ -1.02
YBX3-218ENST00000546298 SLC22A8Q8TCC7 542 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 ZNF721Q8TF20 911 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 IFT81Q8WYA0 676 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 MTFMTQ96DP5 389 aaKnown RBP8.68□□□□□ -1.02
YBX3-218ENST00000546298 PHF12Q96QT6 1004 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 FMO2Q99518 471 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 FAM173AQ9BQD7 235 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 TP63Q9H3D4 680 aaPredicted RBP8.68□□□□□ -1.02
YBX3-218ENST00000546298 CDC42EP4Q9H3Q1 356 aaKnown RBP8.68□□□□□ -1.02
YBX3-218ENST00000546298 NOL11Q9H8H0 719 aaKnown RBP8.68□□□□□ -1.02
YBX3-218ENST00000546298 LIN28AQ9H9Z2 209 aaKnown RBP8.68□□□□□ -1.02
YBX3-218ENST00000546298 COQ3Q9NZJ6 369 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 ZNF180Q9UJW8 692 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 PPT2Q9UMR5 302 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 ATG4BQ9Y4P1 393 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 BSNQ9UPA5 3926 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 ZGRF1Q86YA3 2104 aa8.68□□□□□ -1.02
YBX3-218ENST00000546298 A0A087WUV0 522 aaPredicted RBP8.67□□□□□ -1.02
YBX3-218ENST00000546298 A0A0A6YYD5 115 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 KIF2AO00139 706 aaPredicted RBP8.67□□□□□ -1.02
YBX3-218ENST00000546298 GUCY1B2O75343 617 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 SEMA3DO95025 777 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 SIX3O95343 332 aaPredicted RBP8.67□□□□□ -1.02
YBX3-218ENST00000546298 IGKV3-11P04433 115 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 FAM58BPP0C7Q3 252 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 NR2F6P10588 404 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 GRNP28799 593 aaKnown RBP8.67□□□□□ -1.02
YBX3-218ENST00000546298 GALNSP34059 522 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 BSGP35613 385 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 MAGEA12P43365 314 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 NEK2P51955 445 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 HNRNPH2P55795 449 aaKnown RBP8.67□□□□□ -1.02
YBX3-218ENST00000546298 ASPHQ12797 758 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 IFT88Q13099 833 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 ZNF267Q14586 743 aaPredicted RBP8.67□□□□□ -1.02
YBX3-218ENST00000546298 ZNF750Q32MQ0 723 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 FRG2Q64ET8 278 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 MRM1Q6IN84 353 aaKnown RBP8.67□□□□□ -1.02
YBX3-218ENST00000546298 FAM47EQ6ZV65 393 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 SLC29A4Q7RTT9 530 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 PAGE2Q7Z2X7 111 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 GDF7Q7Z4P5 450 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 FGD2Q7Z6J4 655 aa8.67□□□□□ -1.02
YBX3-218ENST00000546298 MILR1Q7Z6M3 343 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms