RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 C10orf111Q8N326 155 aa18.35■□□□□ 0.53
SKP2-208ENST00000546211 OR52N2Q8NGI0 321 aa18.35■□□□□ 0.53
SKP2-208ENST00000546211 OR5AK3PQ8NH89 298 aa18.35■□□□□ 0.53
SKP2-208ENST00000546211 FIG4Q92562 907 aa18.35■□□□□ 0.53
SKP2-208ENST00000546211 CNRIP1Q96F85 164 aaPredicted RBP18.35■□□□□ 0.53
SKP2-208ENST00000546211 C10orf90Q96M02 699 aa18.35■□□□□ 0.53
SKP2-208ENST00000546211 CSF3RQ99062 836 aa18.35■□□□□ 0.53
SKP2-208ENST00000546211 LRRN3Q9H3W5 708 aa18.35■□□□□ 0.53
SKP2-208ENST00000546211 SYNDIG1Q9H7V2 258 aa18.35■□□□□ 0.53
SKP2-208ENST00000546211 ATXN7L1Q9ULK2 861 aaPredicted RBP18.35■□□□□ 0.53
SKP2-208ENST00000546211 A0A0A6YYC8 382 aaPredicted RBP18.34■□□□□ 0.53
SKP2-208ENST00000546211 RNF103-CHMP3A0A140T963 221 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 FITM1A5D6W6 292 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 TMEM150CB9EJG8 249 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 I3L1I5 382 aaPredicted RBP18.34■□□□□ 0.53
SKP2-208ENST00000546211 CXCR6O00574 342 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 DNAJB6O75190 326 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 C1QCP02747 245 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 POLE2P56282 527 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 RAB38P57729 211 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 SESN3P58005 492 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 VAC14Q08AM6 782 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 MTX3Q5HYI7 312 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 PLA2G2CQ5R387 149 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.34■□□□□ 0.53
SKP2-208ENST00000546211 CPZQ66K79 652 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 OR4K14Q8NGD5 310 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 OR5T3Q8NGG3 340 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 PSMA8Q8TAA3 256 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 TRIM4Q9C037 500 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 SPRTNQ9H040 489 aaPredicted RBP18.34■□□□□ 0.53
SKP2-208ENST00000546211 C11orf16Q9NQ32 467 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 SEMA3GQ9NS98 782 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 ACSL6Q9UKU0 697 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 PCDHGB2Q9Y5G2 931 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 GOLGA4Q13439 2230 aaKnown RBP18.34■□□□□ 0.53
SKP2-208ENST00000546211 A0A1W2PQM1 296 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 PRR33A8MZF0 331 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 H3BNX3 289 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 TNFRSF10AO00220 468 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 CASC3O15234 703 aaKnown RBP18.34■□□□□ 0.53
SKP2-208ENST00000546211 OR2B3O76000 313 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 NSA2O95478 260 aaKnown RBP18.34■□□□□ 0.53
SKP2-208ENST00000546211 C8orf89P0DMQ9 161 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 FEN1P39748 380 aaKnown RBP18.34■□□□□ 0.53
SKP2-208ENST00000546211 CRATP43155 626 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 GRK6P43250 576 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 AVPR1BP47901 424 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 CDK9P50750 372 aaKnown RBP18.34■□□□□ 0.53
SKP2-208ENST00000546211 SIM1P81133 766 aaPredicted RBP18.34■□□□□ 0.53
SKP2-208ENST00000546211 SHC2P98077 582 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 FADDQ13158 208 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 COL9A2Q14055 689 aaPredicted RBP18.34■□□□□ 0.53
SKP2-208ENST00000546211 CEBPEQ15744 281 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 GPR19Q15760 415 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 FAM214AQ32MH5 1076 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 PRR23CQ6ZRP0 262 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 CCDC116Q8IYX3 515 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 OR4D9Q8NGE8 314 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 NCLNQ969V3 563 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 DUS3LQ96G46 650 aaKnown RBP18.34■□□□□ 0.53
SKP2-208ENST00000546211 GORASP2Q9H8Y8 452 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 CLK4Q9HAZ1 481 aaKnown RBP18.34■□□□□ 0.53
SKP2-208ENST00000546211 FANCEQ9HB96 536 aa18.34■□□□□ 0.53
SKP2-208ENST00000546211 SIRT3Q9NTG7 399 aaPredicted RBP18.34■□□□□ 0.53
SKP2-208ENST00000546211 FOXS1O43638 330 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 KCNK5O95279 499 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 ANKRD34CP0C6C1 535 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 MSL3P1P0C860 447 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 PSMA4P25789 261 aaKnown RBP18.33■□□□□ 0.52
SKP2-208ENST00000546211 SLC7A1P30825 629 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 CLPPQ16740 277 aaPredicted RBP18.33■□□□□ 0.52
SKP2-208ENST00000546211 VMACQ2NL98 169 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 ZZZ3Q8IYH5 903 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 GPR135Q8IZ08 494 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 FAM162AQ96A26 154 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 NEURL3Q96EH8 262 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 ZNF681Q96N22 645 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 DPH2Q9BQC3 489 aaPredicted RBP18.33■□□□□ 0.52
SKP2-208ENST00000546211 EFHD1Q9BUP0 239 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 CHST8Q9H2A9 424 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 ENAMQ9NRM1 1142 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 MAP4K5Q9Y4K4 846 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 AP4S1Q9Y587 144 aa18.33■□□□□ 0.52
SKP2-208ENST00000546211 CABIN1Q9Y6J0 2220 aa18.32■□□□□ 0.52
SKP2-208ENST00000546211 DHRS12A0PJE2 317 aa18.32■□□□□ 0.52
SKP2-208ENST00000546211 CYR61O00622 381 aa18.32■□□□□ 0.52
SKP2-208ENST00000546211 CHST10O43529 356 aa18.32■□□□□ 0.52
SKP2-208ENST00000546211 MED26O95402 600 aa18.32■□□□□ 0.52
SKP2-208ENST00000546211 GPIP06744 558 aa18.32■□□□□ 0.52
SKP2-208ENST00000546211 UMPSP11172 480 aa18.32■□□□□ 0.52
SKP2-208ENST00000546211 CCT3P49368 545 aaKnown RBP18.32■□□□□ 0.52
SKP2-208ENST00000546211 ZNF750Q32MQ0 723 aa18.32■□□□□ 0.52
SKP2-208ENST00000546211 ZNF574Q6ZN55 896 aaPredicted RBP18.32■□□□□ 0.52
SKP2-208ENST00000546211 RNF130Q86XS8 419 aa18.32■□□□□ 0.52
SKP2-208ENST00000546211 LRRC25Q8N386 305 aaPredicted RBP18.32■□□□□ 0.52
SKP2-208ENST00000546211 SUN3Q8TAQ9 357 aa18.32■□□□□ 0.52
SKP2-208ENST00000546211 ADAMTS18Q8TE60 1221 aa18.32■□□□□ 0.52
SKP2-208ENST00000546211 TANKQ92844 425 aa18.32■□□□□ 0.52
SKP2-208ENST00000546211 EPS8L2Q9H6S3 715 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms