RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SYDE1Q6ZW31 735 aaPredicted RBP8.59□□□□□ -1.03
CHD4-212ENST00000545083 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.59□□□□□ -1.03
CHD4-212ENST00000545083 KLHDC8AQ8IYD2 350 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 PM20D2Q8IYS1 436 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 MYO1HQ8N1T3 1032 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 FAM13CQ8NE31 585 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 NUBPLQ8TB37 319 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 SLC44A1Q8WWI5 657 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 IGFBPL1Q8WX77 278 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 TMEM158Q8WZ71 300 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 FBXL8Q96CD0 374 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 LINGO1Q96FE5 620 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 HES6Q96HZ4 224 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 FAR2Q96K12 515 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 RUNDC3BQ96NL0 473 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 AIF1LQ9BQI0 150 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 UGT2B28Q9BY64 529 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 FRMD8P1Q9BZ68 369 aaPredicted RBP8.59□□□□□ -1.03
CHD4-212ENST00000545083 UBQLN3Q9H347 655 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 ARL15Q9NXU5 204 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 FBXO5Q9UKT4 447 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 MRPS33Q9Y291 106 aaKnown RBP8.59□□□□□ -1.03
CHD4-212ENST00000545083 DSCAMO60469 2012 aa8.59□□□□□ -1.03
CHD4-212ENST00000545083 LRIT2A6NDA9 550 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 B3GALT2O43825 422 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 TRAPPC6AO75865 159 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 F12P00748 615 aaPredicted RBP8.58□□□□□ -1.04
CHD4-212ENST00000545083 IGKV3-11P04433 115 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 HPNP05981 417 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 HIST1H2AGP0C0S8 130 aaPredicted RBP8.58□□□□□ -1.04
CHD4-212ENST00000545083 TPSB2P20231 275 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 HIST1H2ADP20671 130 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 FPR1P21462 350 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 LOXP28300 417 aaPredicted RBP8.58□□□□□ -1.04
CHD4-212ENST00000545083 RGS4P49798 205 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 CDK9P50750 372 aaKnown RBP8.58□□□□□ -1.04
CHD4-212ENST00000545083 PLA2G16P53816 162 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 CDKN2DP55273 166 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 STXBP1P61764 594 aaKnown RBP8.58□□□□□ -1.04
CHD4-212ENST00000545083 STX4Q12846 297 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 TPSAB1Q15661 275 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 EIPR1Q53HC9 387 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 RBM20Q5T481 1227 aaKnown RBP8.58□□□□□ -1.04
CHD4-212ENST00000545083 BICRALQ6AI39 1079 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 ADNP2Q6IQ32 1131 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 HEPHL1Q6MZM0 1159 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 LRRC8EQ6NSJ5 796 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 CASC4Q6P4E1 433 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 PODNL1Q6PEZ8 512 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 DGAT2L6Q6ZPD8 337 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 VN1R5Q7Z5H4 357 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 CAND1Q86VP6 1230 aaKnown RBP8.58□□□□□ -1.04
CHD4-212ENST00000545083 THOC6Q86W42 341 aaKnown RBP8.58□□□□□ -1.04
CHD4-212ENST00000545083 PALM2Q8IXS6 379 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 SLC22A8Q8TCC7 542 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 DOK4Q8TEW6 326 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 PIK3IP1Q96FE7 263 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 SENP5Q96HI0 755 aaPredicted RBP8.58□□□□□ -1.04
CHD4-212ENST00000545083 HIST1H2AHQ96KK5 128 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 WFIKKN1Q96NZ8 548 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 HIST1H2AJQ99878 128 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 H2AFJQ9BTM1 129 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 DOHHQ9BU89 302 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 TSGA10Q9BZW7 698 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 CALHM2Q9HA72 323 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 CNIH4Q9P003 139 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 ADGRE2Q9UHX3 823 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 IKZF3Q9UKT9 509 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 DAPP1Q9UN19 280 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 SLC22A14Q9Y267 594 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 COMMD10Q9Y6G5 202 aa8.58□□□□□ -1.04
CHD4-212ENST00000545083 RAI1Q7Z5J4 1906 aaPredicted RBP8.58□□□□□ -1.04
CHD4-212ENST00000545083 A0A087X1B8 175 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 SYNDIG1LA6NDD5 238 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 A8MXE2 369 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 PHF1O43189 567 aaPredicted RBP8.57□□□□□ -1.04
CHD4-212ENST00000545083 SOX30O94993 753 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 FBXO45P0C2W1 286 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 GABRB3P28472 473 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 NAGLUP54802 743 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 AP1S2P56377 157 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 CDK16Q00536 496 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 DMTNQ08495 405 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 FAM27E3Q08E93 113 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 TNK1Q13470 666 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 SF3B4Q15427 424 aaKnown RBP eCLIP8.57□□□□□ -1.044e-6■■■■□ 23.6
CHD4-212ENST00000545083 ADPRMQ3LIE5 342 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 HSP90AA5PQ58FG0 334 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 NHSL2Q5HYW2 709 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 WIPI1Q5MNZ9 446 aaPredicted RBP8.57□□□□□ -1.04
CHD4-212ENST00000545083 C10orf62Q5T681 223 aaPredicted RBP8.57□□□□□ -1.04
CHD4-212ENST00000545083 SEL1L2Q5TEA6 688 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 ANKRD22Q5VYY1 191 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 ABHD17CQ6PCB6 329 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 RAD9BQ6WBX8 426 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 TMEM64Q6YI46 380 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 C20orf204Q6ZNR8 217 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 GCNT2Q8N0V5 402 aa8.57□□□□□ -1.04
CHD4-212ENST00000545083 AGGF1Q8N302 714 aaeCLIP8.57□□□□□ -1.04
CHD4-212ENST00000545083 CCT6BQ92526 530 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms