RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CFAP157Q5JU67 520 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 CCNYL2Q5T2Q4 361 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 SPINK14Q6IE38 97 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 C4orf33Q8N1A6 199 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 ARMC10Q8N2F6 343 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 METTL4Q8N3J2 472 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 FAM26EQ8N5C1 309 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 THAP3Q8WTV1 239 aaPredicted RBP14.66□□□□□ -0.06
CCDC78-216ENST00000544996 PTPMT1Q8WUK0 201 aaPredicted RBP14.66□□□□□ -0.06
CCDC78-216ENST00000544996 C5orf34Q96MH7 638 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 PELOQ9BRX2 385 aaKnown RBP14.66□□□□□ -0.06
CCDC78-216ENST00000544996 PARD6BQ9BYG5 372 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 OR8D2Q9GZM6 311 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 OLAHQ9NV23 265 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 LRFN1Q9P244 771 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 VPS29Q9UBQ0 182 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 COPS7AQ9UBW8 275 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 MID2Q9UJV3 735 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 PCDHGB6Q9Y5F9 930 aa14.66□□□□□ -0.06
CCDC78-216ENST00000544996 GLOD5A6NK44 160 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 H3BQF6 201 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 OR10H2O60403 315 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 ESRRBO95718 433 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 GPR75O95800 540 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 AIFM1O95831 613 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 TUBBP07437 444 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 ALOX15P16050 662 aaPredicted RBP14.65□□□□□ -0.06
CCDC78-216ENST00000544996 TRHRP34981 398 aaPredicted RBP14.65□□□□□ -0.06
CCDC78-216ENST00000544996 STT3AP46977 705 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 MAPK12P53778 367 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 NAGLUP54802 743 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 DNAJB13P59910 316 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 IGLV3-21P80748 117 aaPredicted RBP14.65□□□□□ -0.06
CCDC78-216ENST00000544996 MRPL49Q13405 166 aaKnown RBP14.65□□□□□ -0.06
CCDC78-216ENST00000544996 UBAP2LQ14157 1087 aaKnown RBP14.65□□□□□ -0.06
CCDC78-216ENST00000544996 FHL5Q5TD97 284 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 HSDL2Q6YN16 418 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 TMEM156Q8N614 296 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 GBP7Q8N8V2 638 aaPredicted RBP14.65□□□□□ -0.06
CCDC78-216ENST00000544996 TMEM178AQ8NBL3 297 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 MDS2Q8NDY4 140 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 DNAJB8Q8NHS0 232 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 PRR7Q8TB68 274 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 SLC2A12Q8TD20 617 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 TMEM125Q96AQ2 219 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 SIGLEC12Q96PQ1 595 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 GSTO2Q9H4Y5 243 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 MID1IP1Q9NPA3 183 aa14.65□□□□□ -0.06
CCDC78-216ENST00000544996 TENM4Q6N022 2769 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 PRKRAO75569 313 aaKnown RBP14.64□□□□□ -0.07
CCDC78-216ENST00000544996 ITGA10O75578 1167 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 EDN3P14138 238 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 ST13P50502 369 aaKnown RBP14.64□□□□□ -0.07
CCDC78-216ENST00000544996 HLCSP50747 726 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 CSTF3Q12996 717 aaKnown RBP14.64□□□□□ -0.07
CCDC78-216ENST00000544996 EIF2S3LQ2VIR3 472 aaKnown RBP14.64□□□□□ -0.07
CCDC78-216ENST00000544996 OR52E8Q6IFG1 317 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 COMMD6Q7Z4G1 85 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 ST13P4Q8IZP2 240 aaPredicted RBP14.64□□□□□ -0.07
CCDC78-216ENST00000544996 MREGQ8N565 214 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 FAM98AQ8NCA5 519 aaKnown RBP14.64□□□□□ -0.07
CCDC78-216ENST00000544996 ST6GALNAC3Q8NDV1 305 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 OR5L2Q8NGL0 311 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 OR8K3Q8NH51 312 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 PPWD1Q96BP3 646 aaKnown RBP14.64□□□□□ -0.07
CCDC78-216ENST00000544996 APOPT1Q96IL0 206 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 ART5Q96L15 291 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 TAAR6Q96RI8 345 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 HBEGFQ99075 208 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 KLHL1Q9NR64 748 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 OXSMQ9NWU1 459 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 LGALS13Q9UHV8 139 aa14.64□□□□□ -0.07
CCDC78-216ENST00000544996 ZNF223Q9UK11 482 aaPredicted RBP14.64□□□□□ -0.07
CCDC78-216ENST00000544996 YARS2Q9Y2Z4 477 aaKnown RBP14.64□□□□□ -0.07
CCDC78-216ENST00000544996 UBR5O95071 2799 aaPredicted RBP14.63□□□□□ -0.07
CCDC78-216ENST00000544996 CRCPO75575 148 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 SLC25A12O75746 678 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 DDAH2O95865 285 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 PIK3R1P27986 724 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 SSR4P51571 173 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 GALNT1Q10472 559 aaPredicted RBP14.63□□□□□ -0.07
CCDC78-216ENST00000544996 TBL3Q12788 808 aaKnown RBP14.63□□□□□ -0.07
CCDC78-216ENST00000544996 ASPHQ12797 758 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 MAPKAPK3Q16644 382 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 TCHHL1Q5QJ38 904 aaPredicted RBP14.63□□□□□ -0.07
CCDC78-216ENST00000544996 NDUFAF5Q5TEU4 345 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 ZNF468Q5VIY5 522 aaPredicted RBP14.63□□□□□ -0.07
CCDC78-216ENST00000544996 LIPMQ5VYY2 423 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 SLC25A25Q6KCM7 469 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 FRMD7Q6ZUT3 714 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 TRABD2AQ86V40 505 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 SRRM1Q8IYB3 904 aaKnown RBP14.63□□□□□ -0.07
CCDC78-216ENST00000544996 AGAP11Q8TF27 550 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 RIT1Q92963 219 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 SCMH1Q96GD3 660 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 SENP5Q96HI0 755 aaPredicted RBP14.63□□□□□ -0.07
CCDC78-216ENST00000544996 SLX1AQ9BQ83 275 aa14.63□□□□□ -0.07
CCDC78-216ENST00000544996 C12orf65Q9H3J6 166 aaKnown RBP14.63□□□□□ -0.07
CCDC78-216ENST00000544996 TRIM45Q9H8W5 580 aaPredicted RBP14.63□□□□□ -0.07
CCDC78-216ENST00000544996 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms