RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 RLIMQ9NVW2 624 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 IRAK4Q9NWZ3 460 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 GDE1Q9NZC3 331 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 THAP10Q9P2Z0 257 aaPredicted RBP11.84□□□□□ -0.51
PAAF1-215ENST00000544909 TAC3Q9UHF0 121 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 ACSL6Q9UKU0 697 aa11.84□□□□□ -0.51
PAAF1-215ENST00000544909 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.84□□□□□ -0.51
PAAF1-215ENST00000544909 TDRKHQ9Y2W6 561 aaKnown RBP11.84□□□□□ -0.51
PAAF1-215ENST00000544909 PRRC2BQ5JSZ5 2229 aaKnown RBP11.84□□□□□ -0.51
PAAF1-215ENST00000544909 A0A075B6Q4 140 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 IRGMA1A4Y4 181 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 CCRL2O00421 344 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 NDUFS4O43181 175 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 TLL1O43897 1013 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 PTTG1O95997 202 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 H1F0P07305 194 aaKnown RBP11.83□□□□□ -0.51
PAAF1-215ENST00000544909 NR4A1P22736 598 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 TRIM23P36406 574 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 SLC19A1P41440 591 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 UGT2B15P54855 530 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 NTHL1P78549 312 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 ABATP80404 500 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 TSTA3Q13630 321 aaPredicted RBP11.83□□□□□ -0.51
PAAF1-215ENST00000544909 PUM1Q14671 1186 aaKnown RBP eCLIP11.83□□□□□ -0.51
PAAF1-215ENST00000544909 NCF4Q15080 339 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 OCLNQ16625 522 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 DUSP7Q16829 419 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 TCEAL5Q5H9L2 206 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 DCST1Q5T197 706 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 PIP5KL1Q5T9C9 394 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 C12orf73Q69YU5 71 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 FAM83HQ6ZRV2 1179 aaPredicted RBP11.83□□□□□ -0.51
PAAF1-215ENST00000544909 NUDT18Q6ZVK8 323 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 HEATR4Q86WZ0 1026 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 ADGRF3Q8IZF5 1079 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 TBC1D19Q8N5T2 526 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 ANKRD53Q8N9V6 530 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 ZNF740Q8NDX6 193 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 SRFBP1Q8NEF9 429 aaKnown RBP11.83□□□□□ -0.51
PAAF1-215ENST00000544909 OR9Q2Q8NGE9 314 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 UBE2FQ969M7 185 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 TMEM19Q96HH6 336 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 PAWRQ96IZ0 340 aaKnown RBP11.83□□□□□ -0.51
PAAF1-215ENST00000544909 FUZQ9BT04 418 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 SLC25A19Q9HC21 320 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 MS4A12Q9NXJ0 267 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 SELENONQ9NZV5 590 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 SLC9A8Q9Y2E8 581 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 IFT52Q9Y366 437 aa11.83□□□□□ -0.51
PAAF1-215ENST00000544909 GPC6Q9Y625 555 aaPredicted RBP11.83□□□□□ -0.51
PAAF1-215ENST00000544909 TCF20Q9UGU0 1960 aaKnown RBP11.83□□□□□ -0.52
PAAF1-215ENST00000544909 A0A0A6YYD5 115 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 KRBA1A5PL33 1030 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 HMGN4O00479 90 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 PCDH17O14917 1159 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 ZSCAN9O15535 394 aaPredicted RBP11.83□□□□□ -0.52
PAAF1-215ENST00000544909 MAN1A2O60476 641 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 SH3BGRLO75368 114 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 MED26O95402 600 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 GBAP04062 536 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 EIF2S1P05198 315 aaKnown RBP11.83□□□□□ -0.52
PAAF1-215ENST00000544909 GADD45AP24522 165 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 ELAVL4P26378 380 aaKnown RBP11.83□□□□□ -0.52
PAAF1-215ENST00000544909 KHKP50053 298 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 RAB28P51157 221 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 PRDX1Q06830 199 aaKnown RBP11.83□□□□□ -0.52
PAAF1-215ENST00000544909 ENPP2Q13822 863 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 ARMCX4Q5H9R4 360 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 TCTN3Q6NUS6 607 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 PTCHD4Q6ZW05 846 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 C6orf120Q7Z4R8 191 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 HORMAD2Q8N7B1 307 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 ZNF366Q8N895 744 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 B3GNT7Q8NFL0 401 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 OR52J3Q8NH60 311 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 OR5AK3PQ8NH89 298 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 SNRNP27Q8WVK2 155 aaKnown RBP11.83□□□□□ -0.52
PAAF1-215ENST00000544909 RPL3LQ92901 407 aaKnown RBP11.83□□□□□ -0.52
PAAF1-215ENST00000544909 TRNT1Q96Q11 434 aaKnown RBP11.83□□□□□ -0.52
PAAF1-215ENST00000544909 TAPBPLQ9BX59 468 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 C3orf14Q9HBI5 128 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 SLAMF7Q9NQ25 335 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 GPR83Q9NYM4 423 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 PAIP2BQ9ULR5 123 aaKnown RBP11.83□□□□□ -0.52
PAAF1-215ENST00000544909 RPL36Q9Y3U8 105 aaKnown RBP11.83□□□□□ -0.52
PAAF1-215ENST00000544909 ALPK3Q96L96 1907 aa11.83□□□□□ -0.52
PAAF1-215ENST00000544909 A0A1W2PPV9 198 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 SAP18O00422 153 aaKnown RBP11.82□□□□□ -0.52
PAAF1-215ENST00000544909 SYT5O00445 386 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 ZW10O43264 779 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 ADH1BP00325 375 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 SCG5P05408 212 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 BCHEP06276 602 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 STSP08842 583 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 GSTM3P21266 225 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 NTSP30990 170 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 AHRP35869 848 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 CCT3P49368 545 aaKnown RBP11.82□□□□□ -0.52
PAAF1-215ENST00000544909 CRISP3P54108 245 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 MEF2AQ02078 507 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms