RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	TIPARP	Q7Z3E1	657 aa	Known RBP	3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	SERPINA12	Q8IW75	414 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	LMNTD2	Q8IXW0	634 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	C4orf32	Q8N8J7	132 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	OR1B1	Q8NGR6	318 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	PSMA8	Q8TAA3	256 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	GOLGA5	Q8TBA6	731 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	ST7L	Q8TDW4	575 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	TCP11	Q8WWU5	503 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	KRT35	Q92764	455 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	GLYATL1	Q969I3	302 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	MRPL24	Q96A35	216 aa	Known RBP	3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	ANKRD9	Q96BM1	317 aa	Predicted RBP	3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	CABS1	Q96KC9	395 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	CXXC4	Q9H2H0	198 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	ADNP	Q9H2P0	1102 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	MID1IP1	Q9NPA3	183 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	MTRR	Q9UBK8	725 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	SPATA2	Q9UM82	520 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	AUP1	Q9Y679	476 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	SALL1	Q9NSC2	1324 aa		3.37	□□□□□ -1.87
RAP1B-231	ENST00000544639	IGHV3-16	A0A0C4DH30	117 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	SH3PXD2B	A1X283	911 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	SRRM5	B3KS81	715 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	TXNL1	O43396	289 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	PRDM1	O75626	825 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	ANXA9	O76027	345 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	HCK	P08631	526 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	MMP10	P09238	476 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	TPBGL	P0DKB5	382 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	ATP6V1B1	P15313	513 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	OAS2	P29728	719 aa	Known RBP	3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	ID1	P41134	155 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	DSCR10	P59022	87 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	ACY1	Q03154	408 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	ACTN3	Q08043	901 aa	Predicted RBP	3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	NPRL3	Q12980	569 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	RPA4	Q13156	261 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	SLC1A5	Q15758	541 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	DCAF12	Q5T6F0	453 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	C1orf189	Q5VU69	101 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	B3GLCT	Q6Y288	498 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639		Q6ZRG5	221 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	NUFIP2	Q7Z417	695 aa	Known RBP	3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	ITIH5	Q86UX2	942 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	SLC25A42	Q86VD7	318 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	FAM9B	Q8IZU0	186 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	FBXW8	Q8N3Y1	598 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	GVQW1	Q8N7I0	195 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	ZNF713	Q8N859	430 aa	Predicted RBP	3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	SPC24	Q8NBT2	197 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	ZNRF1	Q8ND25	227 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	OR2L2	Q8NH16	312 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	ANKRD27	Q96NW4	1050 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	PSMB7	Q99436	277 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	LRRCC1	Q9C099	1032 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	LIME1	Q9H400	295 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	ZCCHC3	Q9NUD5	404 aa	Known RBP	3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	RARRES3	Q9UL19	164 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	ZNF346	Q9UL40	294 aa	Known RBP	3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	STYXL1	Q9Y6J8	313 aa		3.36	□□□□□ -1.87
RAP1B-231	ENST00000544639	NEDD8-MDP1	E9PL57	170 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	SLC28A1	O00337	649 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	SEMA4F	O95754	770 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	TXNDC12	O95881	172 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	HMOX1	P09601	288 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	FOLR2	P14207	255 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	UGT1A6	P19224	532 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	PPP2R1A	P30153	589 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	STIP1	P31948	543 aa	Known RBP	3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	COPB2	P35606	906 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	SLC1A4	P43007	532 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	MTIF2	P46199	727 aa	Known RBP	3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	ITPK1	Q13572	414 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	PDE7A	Q13946	482 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	CCL14	Q16627	93 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	EPC2	Q52LR7	807 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	KRTAP5-4	Q6L8H1	288 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	ZNF410	Q86VK4	478 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	CNTN4	Q8IWV2	1026 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	ZNF781	Q8N8C0	355 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	CSNK1G2-AS1	Q8NCQ2	148 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	MSANTD4	Q8NCY6	345 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	OR6M1	Q8NGM8	313 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	OR4L1	Q8NH43	312 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	OR4A16	Q8NH70	328 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	SNX21	Q969T3	373 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	PNPLA2	Q96AD5	504 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	ESAM	Q96AP7	390 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	MRPL53	Q96EL3	112 aa	Known RBP	3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	CDHR1	Q96JP9	859 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	CXorf58	Q96LI9	332 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	CCDC43	Q96MW1	224 aa	Known RBP	3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	FOXN4	Q96NZ1	517 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	PUS3	Q9BZE2	481 aa	Known RBP	3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	GAN	Q9H2C0	597 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	DCLRE1B	Q9H816	532 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	SP140L	Q9H930	580 aa		3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	DDX28	Q9NUL7	540 aa	Known RBP	3.35	□□□□□ -1.87
RAP1B-231	ENST00000544639	ACOXL	Q9NUZ1	547 aa		3.35	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms