RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 CYP4Z2PQ8N1L4 340 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 BEST3Q8N1M1 668 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 GHDCQ8N2G8 530 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 DTWD1Q8N5C7 304 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 FAM47BQ8NA70 645 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 OR4K14Q8NGD5 310 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 UHMK1Q8TAS1 419 aaKnown RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 METTL6Q8TCB7 284 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 ELP5Q8TE02 316 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 GRHL3Q8TE85 626 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 NANOS1Q8WY41 292 aaKnown RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 NR4A3Q92570 626 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 RIT1Q92963 219 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 TSLPQ969D9 159 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 ESAMQ96AP7 390 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 METTL2AQ96IZ6 378 aaKnown RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 SMC6Q96SB8 1091 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 ZNF382Q96SR6 550 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 TRMOQ9BU70 441 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 C1QTNF3Q9BXJ4 246 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 RBCK1Q9BYM8 510 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 OR8D2Q9GZM6 311 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 STMN4Q9H169 189 aaPredicted RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 OR51B5Q9H339 312 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 KLHL31Q9H511 634 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 DDX31Q9H8H2 851 aaKnown RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 L2HGDHQ9H9P8 463 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 DMRT3Q9NQL9 472 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 PRDM7Q9NQW5 492 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 ASF1BQ9NVP2 202 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 VPS29Q9UBQ0 182 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 B4GALT7Q9UBV7 327 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 TRPS1Q9UHF7 1281 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 PCTPQ9UKL6 214 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 IKZF3Q9UKT9 509 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 PPIEQ9UNP9 301 aaKnown RBP5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 ZNF780BQ9Y6R6 833 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 CCDC88CQ9P219 2028 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 CSMD2Q7Z408 3487 aa5.24□□□□□ -1.57
CLSTN3-215ENST00000544584 SCN3AQ9NY46 2000 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 IGHV3-20A0A0C4DH32 117 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 A0A0G2JN53 185 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 GNG14A0A1W2PPG7 69 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 C1orf226A1L170 272 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 A8MUA0 341 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 FAM47E-STBD1D6RA91 191 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 CYR61O00622 381 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 PRRG2O14669 202 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 TFECO14948 347 aaPredicted RBP5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 PROM1O43490 865 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 ITGA10O75578 1167 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 SLITRK5O94991 958 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 SNUPNO95149 360 aaKnown RBP5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 SLU7O95391 586 aaKnown RBP5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 CBX6O95503 412 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 ESRRBO95718 433 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 C1QAP02745 245 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 SP1P08047 785 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC35E2P0CK97 266 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 PYGBP11216 843 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 DRD2P14416 443 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 ABOP16442 354 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 PCSK2P16519 638 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 ZNF24P17028 368 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 GNLYP22749 145 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 CERS1P27544 350 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 MPIP34949 423 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 CRHR1P34998 444 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 SERPINB5P36952 375 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 CD96P40200 585 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 STT3AP46977 705 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 MLF1P58340 268 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 DCAF7P61962 342 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 RPS13P62277 151 aaKnown RBP5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 MRPS22P82650 360 aaKnown RBP5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 TNFRSF17Q02223 184 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 CLCQ05315 142 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 ACSM2AQ08AH3 577 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 Q0VFX4 171 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 RUNX2Q13950 521 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 MPEG1Q2M385 716 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 ZXDCQ2QGD7 858 aaPredicted RBP5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 C18orf21Q32NC0 220 aaPredicted RBP5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 FBXO48Q5FWF7 155 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 TBCELQ5QJ74 424 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 NDUFAF5Q5TEU4 345 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 ACSM2BQ68CK6 577 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 TMEM211Q6ICI0 200 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 RPTNQ6XPR3 784 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 RNF111Q6ZNA4 994 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 GPRIN3Q6ZVF9 776 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 CLNKQ7Z7G1 428 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 SLC22A16Q86VW1 577 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 CRLF3Q8IUI8 442 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 GALNT12Q8IXK2 581 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 CCNYL1Q8N7R7 359 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 GOLM1Q8NBJ4 401 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 OR7G1Q8NGA0 311 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 FAM76AQ8TAV0 307 aa5.23□□□□□ -1.57
CLSTN3-215ENST00000544584 NUBPLQ8TB37 319 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms