RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SPTBP11277 2137 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 CYR61O00622 381 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 NTN3O00634 580 aaPredicted RBP28.7■■■□□ 2.19
CCM2-219ENST00000544363 CHST10O43529 356 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 LMNAP02545 664 aaKnown RBP28.7■■■□□ 2.19
CCM2-219ENST00000544363 CSNK2A2P19784 350 aaPredicted RBP28.7■■■□□ 2.19
CCM2-219ENST00000544363 UQCRC2P22695 453 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 ACP1P24666 158 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 ITGA1P56199 1179 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 SHC2P98077 582 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 HSPB3Q12988 150 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 C10orf111Q8N326 155 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 PSMA8Q8TAA3 256 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 ZNF501Q96CX3 271 aaPredicted RBP28.7■■■□□ 2.19
CCM2-219ENST00000544363 CCDC74BQ96LY2 380 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 ZNF681Q96N22 645 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 CLK4Q9HAZ1 481 aaKnown RBP28.7■■■□□ 2.19
CCM2-219ENST00000544363 FANCEQ9HB96 536 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 FGF21Q9NSA1 209 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 FTSJ1Q9UET6 329 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 CLCA2Q9UQC9 943 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 SNX13Q9Y5W8 968 aa28.7■■■□□ 2.19
CCM2-219ENST00000544363 FAM220BPB1ANY3 271 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 KRT36O76013 467 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 GP1BAP07359 652 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 SOAT1P35610 550 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 AVPR1BP47901 424 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 NCBP2P52298 156 aaKnown RBP eCLIP28.69■■■□□ 2.18
CCM2-219ENST00000544363 SIM1P81133 766 aaPredicted RBP28.69■■■□□ 2.18
CCM2-219ENST00000544363 TLDC1Q6P9B6 456 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 GPR135Q8IZ08 494 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 TNIP2Q8NFZ5 429 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 SLC26A7Q8TE54 656 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 PRRX2Q99811 253 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 DCLRE1BQ9H816 532 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 CUTCQ9NTM9 273 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 COL5A1P20908 1838 aaPredicted RBP28.69■■■□□ 2.18
CCM2-219ENST00000544363 CACNA1HO95180 2353 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 ADAMTS20P59510 1910 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 ARPC2O15144 300 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 FKBP6O75344 327 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 C8orf89P0DMQ9 161 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 CD59P13987 128 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 FEN1P39748 380 aaKnown RBP28.69■■■□□ 2.18
CCM2-219ENST00000544363 ZNF750Q32MQ0 723 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 SERPINA11Q86U17 422 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 SAMD14Q8IZD0 417 aaPredicted RBP28.69■■■□□ 2.18
CCM2-219ENST00000544363 RCBTB1Q8NDN9 531 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 PRSS33Q8NF86 280 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 OR4K14Q8NGD5 310 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 SUN3Q8TAQ9 357 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 PNPT1Q8TCS8 783 aaKnown RBP28.69■■■□□ 2.18
CCM2-219ENST00000544363 SIRT3Q9NTG7 399 aaPredicted RBP28.69■■■□□ 2.18
CCM2-219ENST00000544363 SNX8Q9Y5X2 465 aa28.69■■■□□ 2.18
CCM2-219ENST00000544363 FRYLO94915 3013 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 NTRK1P04629 796 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 MPIP34949 423 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 SOX11P35716 441 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 GCGRP47871 477 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 SPEM2Q0P670 501 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 LCN8Q6JVE9 175 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 AAGABQ6PD74 315 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 CYP2R1Q6VVX0 501 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 CCDC116Q8IYX3 515 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 SHISA5Q8N114 240 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 LRGUKQ96M69 825 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 LRFN3Q9BTN0 628 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 EDEM2Q9BV94 578 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 TRIM15Q9C019 465 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 RASSF4Q9H2L5 321 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 RNPEPL1Q9HAU8 725 aa28.68■■■□□ 2.18
CCM2-219ENST00000544363 ELOVL7A1L3X0 281 aa28.67■■■□□ 2.18
CCM2-219ENST00000544363 D6RAR5 112 aa28.67■■■□□ 2.18
CCM2-219ENST00000544363 H0YIG0 161 aa28.67■■■□□ 2.18
CCM2-219ENST00000544363 ATP6V1B2P21281 511 aa28.67■■■□□ 2.18
CCM2-219ENST00000544363 CHI3L1P36222 383 aaPredicted RBP28.67■■■□□ 2.18
CCM2-219ENST00000544363 CDK9P50750 372 aaKnown RBP28.67■■■□□ 2.18
CCM2-219ENST00000544363 ACY1Q03154 408 aa28.67■■■□□ 2.18
CCM2-219ENST00000544363 DUSP2Q05923 314 aa28.67■■■□□ 2.18
CCM2-219ENST00000544363 AASDHQ4L235 1098 aaPredicted RBP28.67■■■□□ 2.18
CCM2-219ENST00000544363 SPATA24Q86W54 205 aa28.67■■■□□ 2.18
CCM2-219ENST00000544363 PROSER1Q86XN7 944 aa28.67■■■□□ 2.18
CCM2-219ENST00000544363 SLITRK4Q8IW52 837 aa28.67■■■□□ 2.18
CCM2-219ENST00000544363 OR5AK3PQ8NH89 298 aa28.67■■■□□ 2.18
CCM2-219ENST00000544363 TANKQ92844 425 aa28.67■■■□□ 2.18
CCM2-219ENST00000544363 ATOH1Q92858 354 aaPredicted RBP28.67■■■□□ 2.18
CCM2-219ENST00000544363 MMABQ96EY8 250 aaPredicted RBP28.67■■■□□ 2.18
CCM2-219ENST00000544363 REXO5Q96IC2 774 aaKnown RBP28.67■■■□□ 2.18
CCM2-219ENST00000544363 HCN3Q9P1Z3 774 aa28.67■■■□□ 2.18
CCM2-219ENST00000544363 ACSL6Q9UKU0 697 aa28.67■■■□□ 2.18
CCM2-219ENST00000544363 A0A1W2PS29 197 aa28.66■■■□□ 2.18
CCM2-219ENST00000544363 FAM227AF5H4B4 570 aa28.66■■■□□ 2.18
CCM2-219ENST00000544363 KRT75O95678 551 aa28.66■■■□□ 2.18
CCM2-219ENST00000544363 RNH1P13489 461 aaKnown RBP28.66■■■□□ 2.18
CCM2-219ENST00000544363 RGNQ15493 299 aa28.66■■■□□ 2.18
CCM2-219ENST00000544363 MICU2Q8IYU8 434 aa28.66■■■□□ 2.18
CCM2-219ENST00000544363 TMEM52Q8NDY8 209 aa28.66■■■□□ 2.18
CCM2-219ENST00000544363 EPS8L2Q9H6S3 715 aa28.66■■■□□ 2.18
CCM2-219ENST00000544363 TMEM9BQ9NQ34 198 aa28.66■■■□□ 2.18
CCM2-219ENST00000544363 RXFP3Q9NSD7 469 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms