RNA–Protein interactions for RNA: ENST00000544179.1

TM7SF3-216, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 2

Gene TM7SF3, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-216ENST00000544179 PANK3Q9H999 370 aa3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 C12orf10Q9HB07 376 aa3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 ZNF701Q9NV72 531 aaPredicted RBP3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 INTS9Q9NV88 658 aaKnown RBP3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 RAB20Q9NX57 234 aa3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 FLRT3Q9NZU0 649 aa3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 SENP1Q9P0U3 644 aa3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 POLKQ9UBT6 870 aa3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 LRWD1Q9UFC0 647 aa3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 APPL1Q9UKG1 709 aa3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 ITGA11Q9UKX5 1188 aa3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 RPH3AQ9Y2J0 694 aaPredicted RBP3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 PADI2Q9Y2J8 665 aa3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 TTC21AQ8NDW8 1320 aa3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 UHRF1BP1Q6BDS2 1440 aa3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 PRG4Q92954 1404 aaPredicted RBP3.84□□□□□ -1.79
TM7SF3-216ENST00000544179 A0A1W2PPW3 197 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 A0A1W2PRB8 838 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 SYCE3A1L190 88 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 GSAPA4D1B5 854 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 GOLGA8IPA6NC78 632 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 KPNA7A9QM74 516 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 H3BQV1 296 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 GAPDHSO14556 408 aaPredicted RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 MEIS2O14770 477 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 ANGPT2O15123 496 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 IDH3BO43837 385 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 VEGFDO43915 354 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 CBR3O75828 277 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 DIRAS3O95661 229 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 RAB40ALP0C0E4 278 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 CCDC130P13994 396 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 S100A1P23297 94 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 PTPN3P26045 913 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 U2AF2P26368 475 aaKnown RBP eCLIP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 RPA1P27694 616 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 PCGF2P35227 344 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 GCKP35557 465 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 ETV5P41161 510 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 MAGEA9P43362 315 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 CRKLP46109 303 aaKnown RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 SLC6A12P48065 614 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 SLC9A3P48764 834 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 CASP9P55211 416 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 B3GALT5-AS1P59052 145 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 CX3CL1P78423 397 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 MAT1AQ00266 395 aaKnown RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 CDR2Q01850 454 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 IL24Q13007 206 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 XRCC4Q13426 336 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 DDX39BQ13838 428 aaKnown RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 RCN2Q14257 317 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 PTPRCAPQ14761 206 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 SPCS2Q15005 226 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 NONOQ15233 471 aaKnown RBP eCLIP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 UGP2Q16851 508 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 CCDC153Q494R4 210 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 CFAP157Q5JU67 520 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 CST9LP1Q5W188 147 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 TMCO2Q7Z6W1 182 aaPredicted RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 TPRA1Q86W33 373 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 COMMD2Q86X83 199 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 SYCE1Q8N0S2 351 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 TMEM178AQ8NBL3 297 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 TRPV1Q8NER1 839 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 OR13C2Q8NGS9 318 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 FAM162AQ96A26 154 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 MAGED4Q96JG8 741 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 RPGRIP1Q96KN7 1286 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 ZNF560Q96MR9 790 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 RPRD1AQ96P16 312 aaPredicted RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 USP28Q96RU2 1077 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 SYT15Q9BQS2 421 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 DCTN5Q9BTE1 182 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 CABLES2Q9BTV7 478 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 MLPHQ9BV36 600 aaPredicted RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 FRMD8P1Q9BZ68 369 aaPredicted RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 SHCBP1LQ9BZQ2 653 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 PIH1D3Q9NQM4 214 aaKnown RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 DDX28Q9NUL7 540 aaKnown RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 PAQR5Q9NXK6 330 aaPredicted RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 DPP3Q9NY33 737 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 TMOD3Q9NYL9 352 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 B3GAT1Q9P2W7 334 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 STX18Q9P2W9 335 aaKnown RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 SLC24A2Q9UI40 661 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 RNF150Q9ULK6 438 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 ABT1Q9ULW3 272 aaKnown RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 LIPT1Q9Y234 373 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 POMT1Q9Y6A1 747 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 PHLPP2Q6ZVD8 1323 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 PCDH11YQ9BZA8 1340 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 INSRP06213 1382 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 ERCC6Q03468 1493 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 GPATCH8Q9UKJ3 1502 aaKnown RBP3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 KIF21AQ7Z4S6 1674 aa3.83□□□□□ -1.8
TM7SF3-216ENST00000544179 TARBP1Q13395 1621 aaKnown RBP3.82□□□□□ -1.8
TM7SF3-216ENST00000544179 CDK13Q14004 1512 aaKnown RBP3.82□□□□□ -1.8
TM7SF3-216ENST00000544179 MAGI1Q96QZ7 1491 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms