RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 MACROD2A1Z1Q3 448 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 SRRM4A7MD48 611 aaKnown RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 ZNF195O14628 629 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 KLF11O14901 512 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 CHUKO15111 745 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 CYTIPO60759 359 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 IGLV2-11P01706 119 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 FERP16591 822 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 HMGB2P26583 209 aaKnown RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 OR1D2P34982 312 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 SOX3P41225 446 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 CLCN4P51793 760 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 HNRNPFP52597 415 aaKnown RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 ATXN3P54252 364 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 DCDC1P59894 354 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 SRP54P61011 504 aaKnown RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 RPL36AP83881 106 aaKnown RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 MSLNQ13421 630 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 ITGA9Q13797 1035 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 CEACAM7Q14002 265 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 GIT2Q14161 759 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 SMC1AQ14683 1233 aaKnown RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 KRT31Q15323 416 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 DNAJC21Q5F1R6 531 aaKnown RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 FAM53AQ6NSI3 398 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 SLC27A4Q6P1M0 643 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 B3GLCTQ6Y288 498 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 PTAR1Q7Z6K3 402 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 TMEM185AQ8NFB2 350 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 SPATA18Q8TC71 538 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 DYRK2Q92630 601 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 ULK4Q96C45 1275 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 NAP1L3Q99457 506 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 EPYCQ99645 322 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 ABCG4Q9H172 646 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 DPEP3Q9H4B8 488 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 ZNF665Q9H7R5 613 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 GPN1Q9HCN4 374 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 SPASTQ9UBP0 616 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 PIN4Q9Y237 131 aaKnown RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 C2CD2Q9Y426 696 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 NEDD4P46934 1319 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 RNF103-CHMP3A0A140T963 221 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 PMS2P5A8MQ11 134 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 RNF103O00237 685 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 MAGEB2O15479 319 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 SYT7O43581 403 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 ATP6V1G1O75348 118 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 KRT36O76013 467 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 PRSS56P0CW18 603 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 ETS1P14921 441 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 AREGP15514 252 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 CCNA2P20248 432 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 RPA1P27694 616 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 SFNP31947 248 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 TIMP3P35625 211 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 OR3A2P47893 321 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 TNFSF10P50591 281 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 CSNK2BP67870 215 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 PHEXP78562 749 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 FFAR4Q5NUL3 377 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 LYPLAL1Q5VWZ2 237 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 OR6B2Q6IFH4 312 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 WDR88Q6ZMY6 472 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 TRMT1LQ7Z2T5 733 aaKnown RBP3.26□□□□□ -1.89
SCFD1-207ENST00000544052 MIER3Q7Z3K6 550 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 TTC5Q8N0Z6 440 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 BATF2Q8N1L9 274 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 FAM89BQ8N5H3 189 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 TMEM99Q8N816 258 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 NIPA2Q8N8Q9 360 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 UBTD2Q8WUN7 234 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 SMPDL3AQ92484 453 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 SUSD6Q92537 303 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 SLC35C1Q96A29 364 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 AZIN2Q96A70 460 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 EEF2KMTQ96G04 330 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 C2orf48Q96LS8 159 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 FAM218AQ96MZ4 157 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 NODALQ96S42 347 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 FAM213AQ9BRX8 229 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 UBAC1Q9BSL1 405 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 LRRC2Q9BYS8 371 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 EXOC1Q9NV70 894 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 RNF186Q9NXI6 227 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 KCNG2Q9UJ96 466 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 EXOC7Q9UPT5 735 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 ANGPTL3Q9Y5C1 460 aa3.26□□□□□ -1.89
SCFD1-207ENST00000544052 A0A1W2PR80 420 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 SLC28A1O00337 649 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 HSF2BPO75031 334 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 CLN5O75503 358 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 PTBP3O95758 552 aaKnown RBP3.25□□□□□ -1.89
SCFD1-207ENST00000544052 KRT3P12035 628 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 LEPRP48357 1165 aaKnown RBP3.25□□□□□ -1.89
SCFD1-207ENST00000544052 XGP55808 180 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 TAF1BQ53T94 588 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-207ENST00000544052 KIAA1161Q6NSJ0 714 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 TMEM64Q6YI46 380 aa3.25□□□□□ -1.89
SCFD1-207ENST00000544052 C15orf52Q6ZUT6 534 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms