RNA–Protein interactions for RNA: ENST00000542145.5

RAP1B-228, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-228ENST00000542145 ID2Q02363 134 aa16.43■□□□□ 0.22
RAP1B-228ENST00000542145 EFTUD2Q15029 972 aaKnown RBP eCLIP16.43■□□□□ 0.226e-7■■■■□ 20.1
RAP1B-228ENST00000542145 NSUN5P2Q63ZY6 315 aa16.43■□□□□ 0.22
RAP1B-228ENST00000542145 TMIGD1Q6UXZ0 262 aa16.43■□□□□ 0.22
RAP1B-228ENST00000542145 SLCO4C1Q6ZQN7 724 aa16.43■□□□□ 0.22
RAP1B-228ENST00000542145 RASGEF1CQ8N431 466 aa16.43■□□□□ 0.22
RAP1B-228ENST00000542145 SIMC1Q8NDZ2 872 aa16.43■□□□□ 0.22
RAP1B-228ENST00000542145 OR2L5Q8NG80 312 aa16.43■□□□□ 0.22
RAP1B-228ENST00000542145 ZNF592Q92610 1267 aa16.43■□□□□ 0.22
RAP1B-228ENST00000542145 SPACA9Q96E40 222 aaPredicted RBP16.43■□□□□ 0.22
RAP1B-228ENST00000542145 HSPBAP1Q96EW2 488 aa16.43■□□□□ 0.22
RAP1B-228ENST00000542145 CHCHD2Q9Y6H1 151 aaPredicted RBP16.43■□□□□ 0.22
RAP1B-228ENST00000542145 A0A088AWK7 358 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 H2AFYO75367 372 aaKnown RBP16.42■□□□□ 0.22
RAP1B-228ENST00000542145 C1QAP02745 245 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 ZNF10P21506 573 aaPredicted RBP16.42■□□□□ 0.22
RAP1B-228ENST00000542145 CTSSP25774 331 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 GDF1P27539 372 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 MTTPP55157 894 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 PDAP1Q13442 181 aaKnown RBP16.42■□□□□ 0.22
RAP1B-228ENST00000542145 PPP1R3AQ16821 1122 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 ADPRMQ3LIE5 342 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 TRIM40Q6P9F5 258 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 ABHD17CQ6PCB6 329 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 VN1R5Q7Z5H4 357 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 C9orf40Q8IXQ3 194 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 LRRC75A-AS1Q8N1F1 130 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 GPATCH11Q8N954 259 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 NUBPLQ8TB37 319 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 SLC22A8Q8TCC7 542 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 DACH2Q96NX9 599 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 BDH2Q9BUT1 245 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 REXO4Q9GZR2 422 aaKnown RBP16.42■□□□□ 0.22
RAP1B-228ENST00000542145 PRDM14Q9GZV8 571 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 PRDM7Q9NQW5 492 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 COPS7AQ9UBW8 275 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 CNOT11Q9UKZ1 510 aaKnown RBP16.42■□□□□ 0.22
RAP1B-228ENST00000542145 GUCA1BQ9UMX6 200 aa16.42■□□□□ 0.22
RAP1B-228ENST00000542145 SMPD2O60906 423 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 CLEC3AO75596 197 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 KRT14P02533 472 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 CCDC175P0C221 793 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 ZNF75DP51815 510 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 PPP2R2BQ00005 443 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 TBL3Q12788 808 aaKnown RBP16.41■□□□□ 0.22
RAP1B-228ENST00000542145 SERTAD2Q14140 314 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 SLBPQ14493 270 aaKnown RBP eCLIP16.41■□□□□ 0.22
RAP1B-228ENST00000542145 ADNP2Q6IQ32 1131 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 CAPN12Q6ZSI9 719 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 FAM13CQ8NE31 585 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 TTLQ8NG68 377 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 OR10G3Q8NGC4 313 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 MAIP1Q8WWC4 291 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 SMPDL3BQ92485 455 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 ANKRD9Q96BM1 317 aaPredicted RBP16.41■□□□□ 0.22
RAP1B-228ENST00000542145 SENP5Q96HI0 755 aaPredicted RBP16.41■□□□□ 0.22
RAP1B-228ENST00000542145 TRIB1Q96RU8 372 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 CNIH4Q9P003 139 aa16.41■□□□□ 0.22
RAP1B-228ENST00000542145 SONP18583 2426 aaKnown RBP16.4■□□□□ 0.22
RAP1B-228ENST00000542145 EXPH5Q8NEV8 1989 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 MBD3L4A6NDZ8 208 aaPredicted RBP16.4■□□□□ 0.22
RAP1B-228ENST00000542145 MBD3L3A6NE82 208 aaPredicted RBP16.4■□□□□ 0.22
RAP1B-228ENST00000542145 TRIM64A6NGJ6 449 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 TRIM64BA6NI03 449 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 MBD3L5A6NJ08 208 aaPredicted RBP16.4■□□□□ 0.22
RAP1B-228ENST00000542145 CD8B2A6NJW9 211 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 HRKO00198 91 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 TRIM3O75382 744 aaPredicted RBP16.4■□□□□ 0.22
RAP1B-228ENST00000542145 ACSL3O95573 720 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 IGKV3-11P04433 115 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 GNAZP19086 355 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 OPRM1P35372 400 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 GDF5P43026 501 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 RCN2Q14257 317 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 C18orf21Q32NC0 220 aaPredicted RBP16.4■□□□□ 0.22
RAP1B-228ENST00000542145 VASNQ6EMK4 673 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 PM20D2Q8IYS1 436 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 SLC15A4Q8N697 577 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 MBD3L2Q8NHZ7 208 aaPredicted RBP16.4■□□□□ 0.22
RAP1B-228ENST00000542145 PDLIM5Q96HC4 596 aaKnown RBP16.4■□□□□ 0.22
RAP1B-228ENST00000542145 F2RL3Q96RI0 385 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 PIP5K1AQ99755 562 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 MAPKAP1Q9BPZ7 522 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 DOHHQ9BU89 302 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 RBM24Q9BX46 236 aaKnown RBP16.4■□□□□ 0.22
RAP1B-228ENST00000542145 NT5DC2Q9H857 520 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 COPS7BQ9H9Q2 264 aaPredicted RBP16.4■□□□□ 0.22
RAP1B-228ENST00000542145 SLC17A6Q9P2U8 582 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 TRPS1Q9UHF7 1281 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 CAMK2AQ9UQM7 478 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 SLC6A5Q9Y345 797 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 MXRA5Q9NR99 2828 aa16.4■□□□□ 0.22
RAP1B-228ENST00000542145 SH3D21A4FU49 640 aa16.39■□□□□ 0.21
RAP1B-228ENST00000542145 ANKDD1BA6NHY2 528 aa16.39■□□□□ 0.21
RAP1B-228ENST00000542145 CDC7O00311 574 aa16.39■□□□□ 0.21
RAP1B-228ENST00000542145 TRAPPC6AO75865 159 aa16.39■□□□□ 0.21
RAP1B-228ENST00000542145 IL18BPO95998 194 aa16.39■□□□□ 0.21
RAP1B-228ENST00000542145 FBXO45P0C2W1 286 aa16.39■□□□□ 0.21
RAP1B-228ENST00000542145 CRYMQ14894 314 aa16.39■□□□□ 0.21
RAP1B-228ENST00000542145 SF3B4Q15427 424 aaKnown RBP eCLIP16.39■□□□□ 0.211e-10■■■■■ 51.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms