RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 IGDCC3Q8IVU1 814 aa17.35■□□□□ 0.37
RAP1B-227ENST00000542018 FBXW8Q8N3Y1 598 aa17.35■□□□□ 0.37
RAP1B-227ENST00000542018 MMGT1Q8N4V1 131 aa17.35■□□□□ 0.37
RAP1B-227ENST00000542018 OR2L5Q8NG80 312 aa17.35■□□□□ 0.37
RAP1B-227ENST00000542018 NEIL3Q8TAT5 605 aa17.35■□□□□ 0.37
RAP1B-227ENST00000542018 PAQR8Q8TEZ7 354 aa17.35■□□□□ 0.37
RAP1B-227ENST00000542018 KIAA1191Q96A73 305 aa17.35■□□□□ 0.37
RAP1B-227ENST00000542018 ANKRD9Q96BM1 317 aaPredicted RBP17.35■□□□□ 0.37
RAP1B-227ENST00000542018 SERINC2Q96SA4 455 aa17.35■□□□□ 0.37
RAP1B-227ENST00000542018 ACKR4Q9NPB9 350 aa17.35■□□□□ 0.37
RAP1B-227ENST00000542018 PRDM7Q9NQW5 492 aa17.35■□□□□ 0.37
RAP1B-227ENST00000542018 MRPS33Q9Y291 106 aaKnown RBP17.35■□□□□ 0.37
RAP1B-227ENST00000542018 VWA7Q9Y334 891 aa17.35■□□□□ 0.37
RAP1B-227ENST00000542018 RTTNQ86VV8 2226 aa17.35■□□□□ 0.37
RAP1B-227ENST00000542018 PABPN1LA6NDY0 278 aaKnown RBP17.34■□□□□ 0.37
RAP1B-227ENST00000542018 DVL2O14641 736 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 HEXAP06865 529 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 ADSLP30566 484 aaPredicted RBP17.34■□□□□ 0.37
RAP1B-227ENST00000542018 SLC6A12P48065 614 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 TRPC1P48995 793 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 ID2Q02363 134 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 C2orf54Q08AI8 447 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 MSS51Q4VC12 460 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 TEDDM1Q5T9Z0 273 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 PRAMEF20Q5VT98 475 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 SLC22A10Q63ZE4 541 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 ZNF793Q6ZN11 406 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 UBE3DQ7Z6J8 389 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 GALNT7Q86SF2 657 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 C9orf40Q8IXQ3 194 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 GPATCH11Q8N954 259 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 OR5L2Q8NGL0 311 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 LINC01560Q8TB33 94 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 CCT6BQ92526 530 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 REXO4Q9GZR2 422 aaKnown RBP17.34■□□□□ 0.37
RAP1B-227ENST00000542018 ZFP64Q9NPA5 681 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 ZNF490Q9ULM2 529 aaPredicted RBP17.34■□□□□ 0.37
RAP1B-227ENST00000542018 ZANQ9Y493 2812 aa17.34■□□□□ 0.37
RAP1B-227ENST00000542018 FBN1P35555 2871 aaKnown RBP17.34■□□□□ 0.37
RAP1B-227ENST00000542018 NPEPPSL1A6NEC2 478 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 FAM187AA6NFU0 413 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 TUBAL3A6NHL2 446 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 HRKO00198 91 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 CLEC3AO75596 197 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 LY6G6DO95868 133 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 IGKV3-11P04433 115 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 TIMP3P35625 211 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 MTTPP55157 894 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 CRYZQ08257 329 aaKnown RBP17.33■□□□□ 0.36
RAP1B-227ENST00000542018 RNASEH2BQ5TBB1 312 aaKnown RBP17.33■□□□□ 0.36
RAP1B-227ENST00000542018 DGAT2L6Q6ZPD8 337 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 CXorf67Q86X51 503 aaPredicted RBP17.33■□□□□ 0.36
RAP1B-227ENST00000542018 TTLQ8NG68 377 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 MAPKAP1Q9BPZ7 522 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 NT5DC2Q9H857 520 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 ZNF629Q9UEG4 869 aaPredicted RBP17.33■□□□□ 0.36
RAP1B-227ENST00000542018 CHCHD2Q9Y6H1 151 aaPredicted RBP17.33■□□□□ 0.36
RAP1B-227ENST00000542018 MED12Q93074 2177 aa17.33■□□□□ 0.36
RAP1B-227ENST00000542018 TLN2Q9Y4G6 2542 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 SYNDIG1LA6NDD5 238 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 WDR47O94967 919 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 LRATO95237 230 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 ZNF37AP17032 561 aaPredicted RBP17.32■□□□□ 0.36
RAP1B-227ENST00000542018 GNAZP19086 355 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 TNNI3P19429 210 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 DCAF7P61962 342 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 CDKL1Q00532 357 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 STX4Q12846 297 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 EFTUD2Q15029 972 aaKnown RBP eCLIP17.32■□□□□ 0.366e-7■■■■□ 20.1
RAP1B-227ENST00000542018 PPP1R7Q15435 360 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 GLE1Q53GS7 698 aaKnown RBP17.32■□□□□ 0.36
RAP1B-227ENST00000542018 TRIM40Q6P9F5 258 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 CIARTQ8N365 385 aaPredicted RBP17.32■□□□□ 0.36
RAP1B-227ENST00000542018 NUBPLQ8TB37 319 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 SPACA9Q96E40 222 aaPredicted RBP17.32■□□□□ 0.36
RAP1B-227ENST00000542018 CERS2Q96G23 380 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 F2RL3Q96RI0 385 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 TIMP4Q99727 224 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 WDR83Q9BRX9 315 aaKnown RBP17.32■□□□□ 0.36
RAP1B-227ENST00000542018 EPB41L4BQ9H329 900 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 QPCTLQ9NXS2 382 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 JKAMPQ9P055 326 aa17.32■□□□□ 0.36
RAP1B-227ENST00000542018 MTRF1LQ9UGC7 380 aaKnown RBP17.32■□□□□ 0.36
RAP1B-227ENST00000542018 FOXD3Q9UJU5 478 aaPredicted RBP17.32■□□□□ 0.36
RAP1B-227ENST00000542018 CNOT11Q9UKZ1 510 aaKnown RBP17.32■□□□□ 0.36
RAP1B-227ENST00000542018 ARID1AO14497 2285 aa17.31■□□□□ 0.36
RAP1B-227ENST00000542018 CLCA1A8K7I4 914 aa17.31■□□□□ 0.36
RAP1B-227ENST00000542018 AHRRA9YTQ3 701 aa17.31■□□□□ 0.36
RAP1B-227ENST00000542018 HRGP04196 525 aa17.31■□□□□ 0.36
RAP1B-227ENST00000542018 CD22P20273 847 aa17.31■□□□□ 0.36
RAP1B-227ENST00000542018 AGFG1P52594 562 aaKnown RBP17.31■□□□□ 0.36
RAP1B-227ENST00000542018 KCNJ2P63252 427 aa17.31■□□□□ 0.36
RAP1B-227ENST00000542018 IGLV3-21P80748 117 aaPredicted RBP17.31■□□□□ 0.36
RAP1B-227ENST00000542018 DUSP8Q13202 625 aa17.31■□□□□ 0.36
RAP1B-227ENST00000542018 ZNF460Q14592 562 aa17.31■□□□□ 0.36
RAP1B-227ENST00000542018 SPANXN3Q5MJ09 141 aa17.31■□□□□ 0.36
RAP1B-227ENST00000542018 FAM45BPQ6NSW5 357 aa17.31■□□□□ 0.36
RAP1B-227ENST00000542018 TRMT10BQ6PF06 316 aaKnown RBP17.31■□□□□ 0.36
RAP1B-227ENST00000542018 OR10G3Q8NGC4 313 aa17.31■□□□□ 0.36
RAP1B-227ENST00000542018 FAM45AQ8TCE6 357 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms