RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 RNF32Q9H0A6 362 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 CDCP1Q9H5V8 836 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 PRTFDC1Q9NRG1 225 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 PNO1Q9NRX1 252 aaKnown RBP13.31□□□□□ -0.28
LTBR-209ENST00000541102 ANKRD10Q9NXR5 420 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 SNX6Q9UNH7 406 aa13.31□□□□□ -0.28
LTBR-209ENST00000541102 TCRBV16S1A1N1A0A5B0 115 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 CLDN4O14493 209 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 GBAP04062 536 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 JUNP05412 331 aaKnown RBP13.3□□□□□ -0.28
LTBR-209ENST00000541102 ATP5A1P25705 553 aaKnown RBP13.3□□□□□ -0.28
LTBR-209ENST00000541102 PTX3P26022 381 aaPredicted RBP13.3□□□□□ -0.28
LTBR-209ENST00000541102 SERPINB1P30740 379 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 SLC1A6P48664 564 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 HNRNPFP52597 415 aaKnown RBP13.3□□□□□ -0.28
LTBR-209ENST00000541102 LIM2P55344 173 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 PPP2R2AP63151 447 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 SRSF11Q05519 484 aaKnown RBP13.3□□□□□ -0.28
LTBR-209ENST00000541102 TBL3Q12788 808 aaKnown RBP13.3□□□□□ -0.28
LTBR-209ENST00000541102 SLC13A2Q13183 592 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 STX3Q13277 289 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 SH2D4BQ5SQS7 431 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 RPUSD3Q6P087 351 aaKnown RBP13.3□□□□□ -0.28
LTBR-209ENST00000541102 CLNKQ7Z7G1 428 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 SLC5A8Q8N695 610 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 BCORP1Q8N888 145 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 TMEM52Q8NDY8 209 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 OR2T11Q8NH01 316 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 PPP1R14CQ8TAE6 165 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 TAAR6Q96RI8 345 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 NPAS2Q99743 824 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 TRMOQ9BU70 441 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 ABI3Q9P2A4 366 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 ADGRE2Q9UHX3 823 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 SLC12A4Q9UP95 1085 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 STK38LQ9Y2H1 464 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 TRAF6Q9Y4K3 522 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 DNAJC15Q9Y5T4 150 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 HIVEP3Q5T1R4 2406 aa13.3□□□□□ -0.28
LTBR-209ENST00000541102 SPTAN1Q13813 2472 aaKnown RBP13.3□□□□□ -0.28
LTBR-209ENST00000541102 RELNP78509 3460 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 IGKV3D-11A0A0A0MRZ8 115 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 MYOCOSA0A1B0GUC4 107 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 TMEM114B3SHH9 223 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 DYNC1I1O14576 645 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 AZIN1O14977 448 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 PRAMEF2O60811 474 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 SNNO75324 88 aaPredicted RBP13.29□□□□□ -0.28
LTBR-209ENST00000541102 ULK1O75385 1050 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 MYO1DO94832 1006 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 HSPA4LO95757 839 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 KRT6AP02538 564 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 KRT6BP04259 564 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 FGF4P08620 206 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 UROSP10746 265 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 NEFHP12036 1026 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 PPP2R1BP30154 601 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 KRT6CP48668 564 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 NAA20P61599 178 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 OC90Q02509 493 aaPredicted RBP13.29□□□□□ -0.28
LTBR-209ENST00000541102 GALNT1Q10472 559 aaPredicted RBP13.29□□□□□ -0.28
LTBR-209ENST00000541102 CUL3Q13618 768 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 TUBA3CQ13748 450 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 AP5B1Q2VPB7 878 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 TMEM35AQ53FP2 167 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 ZNF766Q5HY98 468 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 OR4C11Q6IEV9 310 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 TUBA3EQ6PEY2 450 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 CHSY3Q70JA7 882 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 RPS19BP1Q86WX3 136 aaKnown RBP13.29□□□□□ -0.28
LTBR-209ENST00000541102 ZNF781Q8N8C0 355 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 ACOT4Q8N9L9 421 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 ST6GALNAC3Q8NDV1 305 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 SRFBP1Q8NEF9 429 aaKnown RBP13.29□□□□□ -0.28
LTBR-209ENST00000541102 ELP5Q8TE02 316 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 UCN3Q969E3 161 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 RGMAQ96B86 450 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 KCNC2Q96PR1 638 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 CSF3RQ99062 836 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 MAPKAP1Q9BPZ7 522 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 UTP23Q9BRU9 249 aaKnown RBP13.29□□□□□ -0.28
LTBR-209ENST00000541102 TBCDQ9BTW9 1192 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 DEFB126Q9BYW3 111 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 ROGDIQ9GZN7 287 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 ACBD3Q9H3P7 528 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 OLAHQ9NV23 265 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 PNPOQ9NVS9 261 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 PSD3Q9NYI0 1048 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 KCMF1Q9P0J7 381 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 PPT2Q9UMR5 302 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 DAPP1Q9UN19 280 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 MRPS33Q9Y291 106 aaKnown RBP13.29□□□□□ -0.28
LTBR-209ENST00000541102 CCL27Q9Y4X3 112 aa13.29□□□□□ -0.28
LTBR-209ENST00000541102 USP9YO00507 2555 aaPredicted RBP13.29□□□□□ -0.28
LTBR-209ENST00000541102 SPTBN1Q01082 2364 aaKnown RBP13.29□□□□□ -0.28
LTBR-209ENST00000541102 SPENQ96T58 3664 aaKnown RBP13.28□□□□□ -0.28
LTBR-209ENST00000541102 POLEQ07864 2286 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 A0A0A6YYD5 115 aa13.28□□□□□ -0.28
LTBR-209ENST00000541102 SAGE2PA6NJ88 616 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms