RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 RUNX2Q13950 521 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 NDUFA9Q16795 377 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 PROX2Q3B8N5 592 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 PERM1Q5SV97 790 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 GARNL3Q5VVW2 1013 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 C18orf63Q68DL7 685 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 LCN8Q6JVE9 175 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 SLC48A1Q6P1K1 146 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 ZFP1Q6P2D0 407 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 TMEM71Q6P5X7 295 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 SERPINA11Q86U17 422 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 IFNEQ86WN2 208 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 D2HGDHQ8N465 521 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 OR2T12Q8NG77 320 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 OR10A6Q8NH74 314 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 SLC26A7Q8TE54 656 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 ZFP90Q8TF47 636 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 ZBED6CLQ96FA7 236 aaPredicted RBP13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 AURKBQ96GD4 344 aaPredicted RBP13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 SLC41A2Q96JW4 573 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 TRIM15Q9C019 465 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 TPT1P8Q9HAU6 139 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 S100A14Q9HCY8 104 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 SLAMF7Q9NQ25 335 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 SLC35C2Q9NQQ7 365 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 KCMF1Q9P0J7 381 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 TMEM9Q9P0T7 183 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 CES1P1Q9UKY3 287 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 ZMIZ1Q9ULJ6 1067 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 PCDHGB2Q9Y5G2 931 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 SNX13Q9Y5W8 968 aa13.46□□□□□ -0.25
CYB561A3-216ENST00000540755 ASXL3Q9C0F0 2248 aa13.46□□□□□ -0.26
CYB561A3-216ENST00000540755 FITM1A5D6W6 292 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 AQP12BA6NM10 295 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 C8BP07358 591 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 MSL3P1P0C860 447 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 IL1RNP18510 177 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 CPN2P22792 545 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 DUSP3P51452 185 aaPredicted RBP13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 OR4D2P58180 307 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 SKP1P63208 163 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 CEBPEQ15744 281 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 INAVAQ3KP66 663 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 USP53Q70EK8 1073 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 PROSER1Q86XN7 944 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 PDSS2Q86YH6 399 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 AQP12AQ8IXF9 295 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 HIPK4Q8NE63 616 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 ZFP28Q8NHY6 868 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 PSMA8Q8TAA3 256 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 UCN3Q969E3 161 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 LRGUKQ96M69 825 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 DPYSL5Q9BPU6 564 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 TRIM4Q9C037 500 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 ZNF768Q9H5H4 540 aaKnown RBP13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 ANKHQ9HCJ1 492 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 STARD5Q9NSY2 213 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 C5AR2Q9P296 337 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 EGFL7Q9UHF1 273 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 MAGEL2Q9UJ55 1249 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 RALYQ9UKM9 306 aaKnown RBP13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 NAALAD2Q9Y3Q0 740 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 SPACA6W5XKT8 324 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 COL5A1P20908 1838 aaPredicted RBP13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 CACNA1GO43497 2377 aa13.45□□□□□ -0.26
CYB561A3-216ENST00000540755 APC2O95996 2303 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 TCRBV3S1A0A5B6 114 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 H0Y3Z8 333 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 ARPC2O15144 300 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 PGRMC2O15173 223 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 PRKRAO75569 313 aaKnown RBP13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 CPNE6O95741 557 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 CTSBP07858 339 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 ABCB1P08183 1280 aaPredicted RBP13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 ANKRD34CP0C6C1 535 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 ATP6V1B2P21281 511 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 NTSP30990 170 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 TLX1P31314 330 aaPredicted RBP13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 ARL4DP49703 201 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 MANFP55145 182 aaKnown RBP13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 SLC14A1Q13336 389 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 FAM53BQ14153 422 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 RCN1Q15293 331 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 CLPPQ16740 277 aaPredicted RBP13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 OR52E8Q6IFG1 317 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 PRSS41Q7RTY9 318 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 NAXDQ8IW45 347 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 CA13Q8N1Q1 262 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 GOLM1Q8NBJ4 401 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 FAM120BQ96EK7 910 aaKnown RBP13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 DUS3LQ96G46 650 aaKnown RBP13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 REXO5Q96IC2 774 aaKnown RBP13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 C10orf90Q96M02 699 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 NUDT22Q9BRQ3 303 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 SLC35A5Q9BS91 424 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 SPATA9Q9BWV2 254 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 LRRN3Q9H3W5 708 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 PDP2Q9P2J9 529 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 PSME2Q9UL46 239 aa13.44□□□□□ -0.26
CYB561A3-216ENST00000540755 USP22Q9UPT9 525 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms