RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 NDUFB11Q9NX14 153 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 SPATA7Q9P0W8 599 aa11.7□□□□□ -0.54
NPC1-202ENST00000540608 IQCMA0A1B0GVH7 501 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 TSPAN11A1L157 253 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 C5orf58C9J3I9 102 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 FAAHO00519 579 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 MFN2O95140 757 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 IGFBP1P08833 259 aaPredicted RBP11.69□□□□□ -0.54
NPC1-202ENST00000540608 ELAVL4P26378 380 aaKnown RBP11.69□□□□□ -0.54
NPC1-202ENST00000540608 FEN1P39748 380 aaKnown RBP11.69□□□□□ -0.54
NPC1-202ENST00000540608 DGKGP49619 791 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 XKP51811 444 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 MEF2AQ02078 507 aaPredicted RBP11.69□□□□□ -0.54
NPC1-202ENST00000540608 RUNX1T1Q06455 604 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 ZMAT1Q5H9K5 638 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 RPS26P11Q5JNZ5 115 aaPredicted RBP11.69□□□□□ -0.54
NPC1-202ENST00000540608 TCTN3Q6NUS6 607 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 CASP12Q6UXS9 341 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 LAX1Q8IWV1 398 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 GPR32P1Q8NGA4 272 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 OR8J1Q8NGP2 316 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 TRMT61AQ96FX7 289 aaKnown RBP11.69□□□□□ -0.54
NPC1-202ENST00000540608 ST6GAL2Q96JF0 529 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 DHRS1Q96LJ7 313 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 POLR2J2Q9GZM3 115 aaKnown RBP11.69□□□□□ -0.54
NPC1-202ENST00000540608 SPNS1Q9H2V7 528 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 SSR3Q9UNL2 185 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 CMAHPQ9Y471 501 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 NOX1Q9Y5S8 564 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 DOCK6Q96HP0 2047 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 LILRB3O75022 631 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 SEMA7AO75326 666 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 HBQ1P09105 142 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 IL7P13232 177 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 TAP2Q03519 686 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 TLE2Q04725 743 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 MLLT11Q13015 90 aaPredicted RBP11.69□□□□□ -0.54
NPC1-202ENST00000540608 OCLNQ16625 522 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 MFSD4BQ5TF39 518 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 SAXO2Q658L1 398 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 ERAP2Q6P179 960 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 CNKSR3Q6P9H4 555 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 DPPA4Q7L190 304 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 ADIPOR2Q86V24 386 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 LRRC56Q8IYG6 542 aaPredicted RBP11.69□□□□□ -0.54
NPC1-202ENST00000540608 CFAP206Q8IYR0 622 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 MMP21Q8N119 569 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 HORMAD2Q8N7B1 307 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 PSD4Q8NDX1 1056 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 OR9A1PQ8NGU1 263 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 NEURL3Q96EH8 262 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 EPHX3Q9H6B9 360 aa11.69□□□□□ -0.54
NPC1-202ENST00000540608 DDX28Q9NUL7 540 aaKnown RBP11.69□□□□□ -0.54
NPC1-202ENST00000540608 CENPXA8MT69 81 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 NEDD8-MDP1E9PL57 170 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 H3BN98 237 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 WWP2O00308 870 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 OR10H3O60404 316 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 TPST2O60704 377 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 SOX14O95416 240 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 GNRH1P01148 92 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 LRG1P02750 347 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 CYP17A1P05093 508 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 H1F0P07305 194 aaKnown RBP11.68□□□□□ -0.54
NPC1-202ENST00000540608 WDR5P61964 334 aaKnown RBP11.68□□□□□ -0.54
NPC1-202ENST00000540608 ZNF91Q05481 1191 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 LARS2Q15031 903 aaKnown RBP11.68□□□□□ -0.54
NPC1-202ENST00000540608 TRIM60Q495X7 471 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 ZFP69Q49AA0 526 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 THOC7Q6I9Y2 204 aaKnown RBP11.68□□□□□ -0.54
NPC1-202ENST00000540608 ANKRD33Q7Z3H0 272 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 WDR53Q7Z5U6 358 aaPredicted RBP11.68□□□□□ -0.54
NPC1-202ENST00000540608 GATAD2AQ86YP4 633 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 PHC2Q8IXK0 858 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 FAM181AQ8N9Y4 354 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 LMNTD1Q8N9Z9 388 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 OR9Q1Q8NGQ5 310 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 LILRB4Q8NHJ6 448 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 UBE2E3Q969T4 207 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 AP2M1Q96CW1 435 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 SLC6A18Q96N87 628 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 TEFMQ96QE5 360 aaKnown RBP11.68□□□□□ -0.54
NPC1-202ENST00000540608 TSSK6Q9BXA6 273 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 RSPO3Q9BXY4 272 aaPredicted RBP11.68□□□□□ -0.54
NPC1-202ENST00000540608 POLR2J3Q9H1A7 115 aaKnown RBP11.68□□□□□ -0.54
NPC1-202ENST00000540608 MARCH7Q9H992 704 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 HMX3A6NHT5 357 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 HEPACAM2A8MVW5 462 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 BCHEP06276 602 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 TRAPPC2P0DI81 140 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 TRAPPC2BP0DI82 140 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 CCR2P41597 374 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 GSTM5P46439 218 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 RPS5P46782 204 aaKnown RBP11.68□□□□□ -0.54
NPC1-202ENST00000540608 SCN1BQ07699 218 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 C1DQ13901 141 aaKnown RBP11.68□□□□□ -0.54
NPC1-202ENST00000540608 HEPACAMQ14CZ8 416 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 PGBD2Q6P3X8 592 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 VN1R5Q7Z5H4 357 aa11.68□□□□□ -0.54
NPC1-202ENST00000540608 TCEANCQ8N8B7 351 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms