RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 PTRHD1Q6GMV3 140 aaKnown RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 POMZP3Q6PJE2 187 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 UNC5DQ6UXZ4 953 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 BEND4Q6ZU67 534 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 KIAA1958Q8N8K9 716 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 RPL3LQ92901 407 aaKnown RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 L3HYPDHQ96EM0 354 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 OR2M4Q96R27 311 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 SLC29A1Q99808 456 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 BTBD1Q9H0C5 482 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 OPA3Q9H6K4 179 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 FBXO8Q9NRD0 319 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 PCDHGA1Q9Y5H4 931 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 BRINP1O60477 761 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 PEX11BO96011 259 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 SLC35E2BP0CK96 405 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 SMIM18P0DKX4 95 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 DGKAP23743 735 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 PAX6P26367 422 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 CD86P42081 329 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 SLC1A2P43004 574 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 TTPAP49638 278 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 NR0B1P51843 470 aaKnown RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 TWF1Q12792 350 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 LCP2Q13094 533 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 KEAP1Q14145 624 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 MBTPS1Q14703 1052 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 TCEAL5Q5H9L2 206 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 BCL2L15Q5TBC7 163 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 HIST2H3PS2Q5TEC6 136 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 CERS6Q6ZMG9 384 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 MTSS1LQ765P7 747 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 FAM122BQ7Z309 247 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 LINC00469Q8N7U9 141 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 FBXO22Q8NEZ5 403 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 AUTS2Q8WXX7 1259 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 RRNAD1Q96FB5 475 aaKnown RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 SORT1Q99523 831 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 VRK1Q99986 396 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 GATA5Q9BWX5 397 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 ZDHHC5Q9C0B5 715 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 POLR2J2Q9GZM3 115 aaKnown RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 MTG2Q9H4K7 406 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 TMEM185BQ9H7F4 350 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 ZBTB20Q9HC78 741 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 EMC7Q9NPA0 242 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 NUDT15Q9NV35 164 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 NLE1Q9NVX2 485 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 ZNF490Q9ULM2 529 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 VWA7Q9Y334 891 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 BORCS7-ASMTA0A0B4J1R7 106 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 AGAP5A6NIR3 686 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 KCNJ13O60928 360 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 URODP06132 367 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 GKN3PP0CG01 181 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 UROSP10746 265 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 EFNA1P20827 205 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 CYP2A7P20853 494 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 MECP2P51608 486 aaKnown RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 CLCN4P51793 760 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 ARSFP54793 590 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 ABHD18Q0P651 414 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 HNRNPA0Q13151 305 aaKnown RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 NAE1Q13564 534 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 DYRK1AQ13627 763 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 C4orf46Q504U0 113 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 NCEH1Q6PIU2 408 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 GPRIN3Q6ZVF9 776 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 TSPYL5Q86VY4 417 aaPredicted RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 CILP2Q8IUL8 1156 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 HDDC3Q8N4P3 179 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 C11orf65Q8NCR3 313 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 ZNF461Q8TAF7 563 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 ACDQ96AP0 544 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 RAD51AP1Q96B01 352 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 DUS3LQ96G46 650 aaKnown RBP5.81□□□□□ -1.48
PTPRD-214ENST00000540109 SCP2D1Q9UJQ7 156 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 PRELID3BQ9Y3B1 194 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 SNX10Q9Y5X0 201 aa5.81□□□□□ -1.48
PTPRD-214ENST00000540109 PRORSD1PA6NEY8 169 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 TSPAN3O60637 253 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 GSRP00390 522 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 AHSGP02765 367 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 RPN2P04844 631 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 UBBP0CG47 229 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 UBCP0CG48 685 aaKnown RBP5.8□□□□□ -1.48
PTPRD-214ENST00000540109 TMEM11P17152 192 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 S100A7P31151 101 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 OMPP47874 163 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 NRIP1P48552 1158 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 RPS27AP62979 156 aaKnown RBP5.8□□□□□ -1.48
PTPRD-214ENST00000540109 UBA52P62987 128 aaKnown RBP5.8□□□□□ -1.48
PTPRD-214ENST00000540109 RNF4P78317 190 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 CLINT1Q14677 625 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 LAPTM4AQ15012 233 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 RETSATQ6NUM9 610 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 DCUN1D3Q8IWE4 304 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 Q8N402 240 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 DBF4BQ8NFT6 615 aa5.8□□□□□ -1.48
PTPRD-214ENST00000540109 ARRDC2Q8TBH0 407 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms