RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SMU1Q2TAY7 513 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 IER5LQ5T953 404 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 SHQ1Q6PI26 577 aaKnown RBP9.55□□□□□ -0.88
TRAF1-202ENST00000540010 KIAA1324Q6UXG2 1013 aaKnown RBP9.55□□□□□ -0.88
TRAF1-202ENST00000540010 DNAJC5GQ8N7S2 189 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 OR6K6Q8NGW6 343 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 NXPE3Q969Y0 559 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 TTTY10Q9BZA0 68 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 KCNN2Q9H2S1 579 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 TUBB1Q9H4B7 451 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 PAQR5Q9NXK6 330 aaPredicted RBP9.55□□□□□ -0.88
TRAF1-202ENST00000540010 SLC27A6Q9Y2P4 619 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 TMED5Q9Y3A6 229 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 ANKRD36A6QL64 1941 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 LAMA2P24043 3122 aaKnown RBP9.55□□□□□ -0.88
TRAF1-202ENST00000540010 CXorf51AA0A1B0GTR3 108 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 M0R129 80 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 GTPBP1O00178 669 aaKnown RBP9.55□□□□□ -0.88
TRAF1-202ENST00000540010 DNTTP04053 509 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 GADD45AP24522 165 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 CDK5R2Q13319 367 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 NFE2L1Q14494 772 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 GPR68Q15743 365 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 SLC35F1Q5T1Q4 408 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 TMIGD1Q6UXZ0 262 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 EGLN2Q96KS0 407 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 PLAGL1Q9UM63 463 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 A0A096LPI6 279 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 RIIAD1A6NNX1 92 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 WASH3PC4AMC7 463 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 I3L521 148 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 POP7O75817 140 aaKnown RBP9.55□□□□□ -0.88
TRAF1-202ENST00000540010 SLITRK5O94991 958 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 ETFAP13804 333 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 ATF4P18848 351 aaPredicted RBP9.55□□□□□ -0.88
TRAF1-202ENST00000540010 PPP5CP53041 499 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 ERVK-21P61565 698 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 RCAN2Q14206 197 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 PDGFRLQ15198 375 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 SMN1Q16637 294 aaKnown RBP9.55□□□□□ -0.88
TRAF1-202ENST00000540010 SLC36A3Q495N2 470 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 SPATS1Q496A3 300 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.55□□□□□ -0.88
TRAF1-202ENST00000540010 PARS2Q7L3T8 475 aaKnown RBP9.55□□□□□ -0.88
TRAF1-202ENST00000540010 LHFPL3Q86UP9 236 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 AMZ2Q86W34 360 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 TRAM1L1Q8N609 369 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 OR4C6Q8NH72 309 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 LRRC20Q8TCA0 184 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 RSPRY1Q96DX4 576 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 C12orf66Q96MD2 445 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 ASB16Q96NS5 453 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 ZNF385DQ9H6B1 395 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 TMEM27Q9HBJ8 222 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 ZSCAN32Q9NX65 697 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 STON1Q9Y6Q2 735 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 CHD5Q8TDI0 1954 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 TRIM64CA6NLI5 447 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 CTSLP07711 333 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 MATN1P21941 496 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 DPP6P42658 865 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 NR4A2P43354 598 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 AP2S1P53680 142 aaPredicted RBP9.55□□□□□ -0.88
TRAF1-202ENST00000540010 RAB8AP61006 207 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 SLC3A1Q07837 685 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 EXOC3L2Q2M3D2 409 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 SPIN4Q56A73 249 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 PLEKHG7Q6ZR37 379 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 DCP2Q8IU60 420 aaKnown RBP9.55□□□□□ -0.88
TRAF1-202ENST00000540010 TIGD4Q8IY51 512 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 ZFP41Q8N8Y5 198 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 MRGPRX3Q96LB0 322 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 C1QTNF7Q9BXJ2 289 aa9.55□□□□□ -0.88
TRAF1-202ENST00000540010 TRAV6A0A075B6T7 132 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 PRRT4C9JH25 899 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 RFXAPO00287 272 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 KLK8O60259 260 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 GMFBP60983 142 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 ZNF45Q02386 682 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 ATAT1Q5SQI0 421 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 PRAMEF14Q5SWL7 426 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 PRAMEF13Q5VWM6 474 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 KRT77Q7Z794 578 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 PLPP6Q8IY26 295 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 SLC37A3Q8NCC5 494 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 FAM46DQ8NEK8 389 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 GLYATL1Q969I3 302 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 RHBDF1Q96CC6 855 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 DZANK1Q9NVP4 752 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 TAS2R9Q9NYW1 312 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 YBX2Q9Y2T7 364 aaKnown RBP9.54□□□□□ -0.88
TRAF1-202ENST00000540010 PPIL1Q9Y3C6 166 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 GPR45Q9Y5Y3 372 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 URADA6NGE7 173 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 LRRC72A6NJI9 287 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 ACOT8O14734 319 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 HOXC11O43248 304 aaPredicted RBP9.54□□□□□ -0.88
TRAF1-202ENST00000540010 ERI3O43414 337 aaKnown RBP9.54□□□□□ -0.88
TRAF1-202ENST00000540010 MMP20O60882 483 aa9.54□□□□□ -0.88
TRAF1-202ENST00000540010 LAMP1P11279 417 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms