RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 CSTF1Q05048 431 aaKnown RBP12.04□□□□□ -0.48
DDX55-206ENST00000539934 SLC12A1Q13621 1099 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 UBXN2BQ14CS0 331 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 SLC30A6Q6NXT4 461 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 RAB44Q7Z6P3 723 aaPredicted RBP12.04□□□□□ -0.48
DDX55-206ENST00000539934 TMEM135Q86UB9 458 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 DENND1CQ8IV53 801 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 KLHDC8BQ8IXV7 354 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 CFAP52Q8N1V2 620 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 TXNDC5Q8NBS9 432 aaKnown RBP12.04□□□□□ -0.48
DDX55-206ENST00000539934 SNX33Q8WV41 574 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 FGF14Q92915 247 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 PLD4Q96BZ4 506 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 DMRTB1Q96MA1 342 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 ZSWIM3Q96MP5 696 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 FCRL3Q96P31 734 aaPredicted RBP12.04□□□□□ -0.48
DDX55-206ENST00000539934 GSX1Q9H4S2 264 aaPredicted RBP12.04□□□□□ -0.48
DDX55-206ENST00000539934 DDX31Q9H8H2 851 aaKnown RBP12.04□□□□□ -0.48
DDX55-206ENST00000539934 SLC17A7Q9P2U7 560 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 HEY2Q9UBP5 337 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 DNMT3AQ9Y6K1 912 aaPredicted RBP12.04□□□□□ -0.48
DDX55-206ENST00000539934 MYLKQ15746 1914 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 F5P12259 2224 aa12.04□□□□□ -0.48
DDX55-206ENST00000539934 FAM237BA0A1B0GVD1 139 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 GSAPA4D1B5 854 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 TSPAN12O95859 305 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 ENO1P06733 434 aaKnown RBP12.03□□□□□ -0.48
DDX55-206ENST00000539934 HOXC4P09017 264 aaPredicted RBP12.03□□□□□ -0.48
DDX55-206ENST00000539934 IRF1P10914 325 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 BMP4P12644 408 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 MUC1P15941 1255 aaPredicted RBP12.03□□□□□ -0.48
DDX55-206ENST00000539934 CPN2P22792 545 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 FPR3P25089 353 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 EPHB3P54753 998 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 NTHL1P78549 312 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 FGL1Q08830 312 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 SLC10A7Q0GE19 358 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.03□□□□□ -0.48
DDX55-206ENST00000539934 GFOD2Q3B7J2 385 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 RPL13AP3Q6NVV1 102 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 KLHL24Q6TFL4 600 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 MCATQ8IVS2 390 aaKnown RBP12.03□□□□□ -0.48
DDX55-206ENST00000539934 OR8H3Q8N146 312 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 AGBL5Q8NDL9 886 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 CHDHQ8NE62 594 aaPredicted RBP12.03□□□□□ -0.48
DDX55-206ENST00000539934 ZFP90Q8TF47 636 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 MFSD3Q96ES6 412 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 MYEOVQ96EZ4 313 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 SORT1Q99523 831 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 ANKRD60Q9BZ19 345 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 ASPSCR1Q9BZE9 553 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 DERL2Q9GZP9 239 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 C12orf65Q9H3J6 166 aaKnown RBP12.03□□□□□ -0.48
DDX55-206ENST00000539934 CHRAC1Q9NRG0 131 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.03□□□□□ -0.48
DDX55-206ENST00000539934 PISDQ9UG56 409 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 PURGQ9UJV8 347 aaKnown RBP12.03□□□□□ -0.48
DDX55-206ENST00000539934 INSL5Q9Y5Q6 135 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 SMG1Q96Q15 3661 aaKnown RBP12.03□□□□□ -0.48
DDX55-206ENST00000539934 A0A1W2PN81 502 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 FAM170BA6NMN3 283 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 NPIPB8E9PQR5 432 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 DFNA5O60443 496 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 DPM1O60762 260 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 XYLBO75191 536 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 RFPL1O75677 317 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 UGT2B17O75795 530 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 IFNA10P01566 189 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 LAMP2P13473 410 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 JUNBP17275 347 aaPredicted RBP12.03□□□□□ -0.48
DDX55-206ENST00000539934 XRCC1P18887 633 aaPredicted RBP12.03□□□□□ -0.48
DDX55-206ENST00000539934 HOXA9P31269 272 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 SLC6A4P31645 630 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 CHRNA7P36544 502 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 UGT2B15P54855 530 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 RAC3P60763 192 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 MAXP61244 160 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 IL10RBQ08334 325 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 PRKAA1Q13131 559 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 ILKQ13418 452 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 SYT16Q17RD7 645 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 ZNF385CQ66K41 422 aaPredicted RBP12.03□□□□□ -0.48
DDX55-206ENST00000539934 HEPHL1Q6MZM0 1159 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 PARM1Q6UWI2 310 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 SH2D5Q6ZV89 423 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 ZNF707Q96C28 371 aaPredicted RBP12.03□□□□□ -0.48
DDX55-206ENST00000539934 CLUHP3Q96NS8 147 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 ZNF385AQ96PM9 386 aaKnown RBP12.03□□□□□ -0.48
DDX55-206ENST00000539934 SPATA9Q9BWV2 254 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 SLC25A51Q9H1U9 297 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 GKN1Q9NS71 199 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 ALG5Q9Y673 324 aa12.03□□□□□ -0.48
DDX55-206ENST00000539934 ZCWPW2A0A1B0GU75 182 aa12.02□□□□□ -0.48
DDX55-206ENST00000539934 C2orf78A6NCI8 922 aa12.02□□□□□ -0.48
DDX55-206ENST00000539934 DNASE2O00115 360 aaPredicted RBP12.02□□□□□ -0.48
DDX55-206ENST00000539934 FOXE1O00358 373 aaPredicted RBP12.02□□□□□ -0.48
DDX55-206ENST00000539934 GATBO75879 557 aaKnown RBP12.02□□□□□ -0.48
DDX55-206ENST00000539934 OR2B3O76000 313 aa12.02□□□□□ -0.48
DDX55-206ENST00000539934 STC2O76061 302 aa12.02□□□□□ -0.48
DDX55-206ENST00000539934 CSTAP01040 98 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms