RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SPATA17Q96L03 361 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 FCRL1Q96LA6 429 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SDHCQ99643 169 aaPredicted RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SEMA3CQ99985 751 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 TMEM246Q9BRR3 403 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 C6orf62Q9GZU0 229 aaPredicted RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 P2RY12Q9H244 342 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SMOC1Q9H4F8 434 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SERHLQ9NQF3 203 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 TMEM30AQ9NV96 361 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 STMN3Q9NZ72 180 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 PDP1Q9P0J1 537 aaPredicted RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 UBA2Q9UBT2 640 aaPredicted RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SEC14L4Q9UDX3 406 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 EIF2B4Q9UI10 523 aaKnown RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 FBXO10Q9UK96 956 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 IKZF3Q9UKT9 509 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 CORO2BQ9UQ03 480 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SCML2Q9UQR0 700 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 PADI2Q9Y2J8 665 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 OARD1Q9Y530 152 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 KCTD3Q9Y597 815 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 FLNBO75369 2602 aaKnown RBP7.32□□□□□ -1.24
CCDC60-204ENST00000539847 SCN1AP35498 2009 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 APC2O95996 2303 aa7.32□□□□□ -1.24
CCDC60-204ENST00000539847 IQCMA0A1B0GVH7 501 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 MEIOCA2RUB1 952 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 NPEPPSL1A6NEC2 478 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 ARRDC5A6NEK1 342 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 OR51F1A6NGY5 319 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 J3KR12 359 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 LINC01387J3KSC0 135 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 K7EQS6 105 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 AGRPO00253 132 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 EIF3FO00303 357 aaPredicted RBP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 CCRL2O00421 344 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 MANBAO00462 879 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 ADAMDEC1O15204 470 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 STX7O15400 261 aaKnown RBP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 PROM1O43490 865 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 RAMP2O60895 175 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 TMCC2O75069 709 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 PDE9AO76083 593 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 CRYZL1O95825 349 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 GAAP10253 952 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 DBTP11182 482 aaKnown RBP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 IL7P13232 177 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 CTPS1P17812 591 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 GABRB1P18505 474 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 CPN2P22792 545 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 TNFSF8P32971 234 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 TNFRSF4P43489 277 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 RGS4P49798 205 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 HMGA2P52926 109 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 AP2S1P53680 142 aaPredicted RBP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 RPS14P62263 151 aaKnown RBP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 SLC7A9P82251 487 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 RING1Q06587 406 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 HSPA14Q0VDF9 509 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 SLC14A1Q13336 389 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 TNK1Q13470 666 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 LAPTM5Q13571 262 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 DGCR6Q14129 220 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 BOP1Q14137 746 aaKnown RBP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 ABRAXAS2Q15018 415 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 NCF4Q15080 339 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 DUOXA1Q1HG43 343 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 GGTA1PQ4G0N0 100 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 TRIM61Q5EBN2 209 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 FAM209AQ5JX71 171 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 SPANXN4Q5MJ08 99 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 EOGTQ5NDL2 527 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 LYPLAL1Q5VWZ2 237 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 MEDAGQ5VYS4 303 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 ANKRD34AQ69YU3 496 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 LRFN4Q6PJG9 635 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 METAP1DQ6UB28 335 aaPredicted RBP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 SCIMPQ6UWF3 145 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 HSDL2Q6YN16 418 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 GCNT7Q6ZNI0 430 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 IDO2Q6ZQW0 420 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 FAM92BQ6ZTR7 304 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 C8orf86Q6ZUL3 223 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 CREB3L2Q70SY1 520 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 AHSA2Q719I0 299 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 TRMT11Q7Z4G4 463 aaKnown RBP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 SCD5Q86SK9 330 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 ZNF605Q86T29 641 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 CCDC71Q8IV32 467 aaPredicted RBP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 PGBD5Q8N414 524 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.31□□□□□ -1.24
CCDC60-204ENST00000539847 ATG16L2Q8NAA4 619 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 MDGA1Q8NFP4 955 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 OR52B6Q8NGF0 335 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 ZFAND1Q8TCF1 268 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 HCAR2Q8TDS4 363 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 EEF1AKMT1Q8WVE0 214 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 PYCR2Q96C36 320 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 OTUB2Q96DC9 234 aa7.31□□□□□ -1.24
CCDC60-204ENST00000539847 LINGO1Q96FE5 620 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms