RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ACTR8Q9H981 624 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 CLK4Q9HAZ1 481 aaKnown RBP13.92□□□□□ -0.18
USB1-203ENST00000539737 TMEM216Q9P0N5 145 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 G3V3Y1 287 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 COPEO14579 308 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 TFECO14948 347 aaPredicted RBP13.91□□□□□ -0.18
USB1-203ENST00000539737 PRAMEF4O60810 478 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 CLEC3AO75596 197 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 MLYCDO95822 493 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 RPS17P08708 135 aaKnown RBP13.91□□□□□ -0.18
USB1-203ENST00000539737 KRT4P19013 534 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 CD22P20273 847 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 ATP5F1P24539 256 aaPredicted RBP13.91□□□□□ -0.18
USB1-203ENST00000539737 KRTAP21-3Q3LHN1 58 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 CCDC153Q494R4 210 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 DEFB134Q4QY38 66 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 PRAMEF9Q5VWM5 478 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 LIPJQ5W064 366 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 MED27Q6P2C8 311 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 MDGA2Q7Z553 956 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 SLC22A9Q8IVM8 553 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 AFAP1L2Q8N4X5 818 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 HORMAD2Q8N7B1 307 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 OR5M9Q8NGP3 310 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 ELP5Q8TE02 316 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 CREB3L4Q8TEY5 395 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 CCT6BQ92526 530 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 GAL3ST3Q96A11 431 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 TBC1D20Q96BZ9 403 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 REPS1Q96D71 796 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 FAR2Q96K12 515 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 C1QTNF3Q9BXJ4 246 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 RHBGQ9H310 441 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 IPPKQ9H8X2 491 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 MKS1Q9NXB0 559 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 ADGRE2Q9UHX3 823 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 MID2Q9UJV3 735 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 PCTPQ9UKL6 214 aa13.91□□□□□ -0.18
USB1-203ENST00000539737 A0A088AWK7 358 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 MYOCOSA0A1B0GUC4 107 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 CCDC151A5D8V7 595 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 LRRC14BA6NHZ5 514 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 FAM166BA8MTA8 275 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 MAGEB17A8MXT2 336 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 C4orf51C9J302 202 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 GALR3O60755 368 aaPredicted RBP13.9□□□□□ -0.18
USB1-203ENST00000539737 FHP07954 510 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 SBK3P0C264 359 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 ZNF888P0CJ79 500 aaPredicted RBP13.9□□□□□ -0.18
USB1-203ENST00000539737 CD99P14209 185 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 ZNF10P21506 573 aaPredicted RBP13.9□□□□□ -0.18
USB1-203ENST00000539737 PPP2R1BP30154 601 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 CRHR1P34998 444 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 ARL1P40616 181 aaPredicted RBP13.9□□□□□ -0.18
USB1-203ENST00000539737 NUP107P57740 925 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 MLF1P58340 268 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 HERVK_113P63132 956 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 PHEXP78562 749 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 PMPCAQ10713 525 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 TOR1AIP1Q5JTV8 583 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 SH2D5Q6ZV89 423 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 MYLK4Q86YV6 388 aaPredicted RBP13.9□□□□□ -0.18
USB1-203ENST00000539737 LAS2Q8IYD9 372 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 TMEM151AQ8N4L1 468 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 FAM98AQ8NCA5 519 aaKnown RBP13.9□□□□□ -0.18
USB1-203ENST00000539737 PLPP5Q8NEB5 264 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 RDH11Q8TC12 318 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 CCDC126Q96EE4 140 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 APOPT1Q96IL0 206 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 TMUB1Q9BVT8 246 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 ERVK-6Q9BXR3 956 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 IQCGQ9H095 443 aaKnown RBP13.9□□□□□ -0.18
USB1-203ENST00000539737 NECTIN3Q9NQS3 549 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 DEPPQ9NTK1 212 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 CCM2LQ9NUG4 571 aaPredicted RBP13.9□□□□□ -0.18
USB1-203ENST00000539737 COQ3Q9NZJ6 369 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 GRID1Q9ULK0 1009 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 LIPGQ9Y5X9 500 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 EML6Q6ZMW3 1958 aa13.9□□□□□ -0.18
USB1-203ENST00000539737 CHST10O43529 356 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 PEX1O43933 1283 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 PRKNO60260 465 aaPredicted RBP13.89□□□□□ -0.19
USB1-203ENST00000539737 MYL2P10916 166 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 RNH1P13489 461 aaKnown RBP13.89□□□□□ -0.19
USB1-203ENST00000539737 CCNG1P51959 295 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 SLC18A2Q05940 514 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 TGM3Q08188 693 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 MYBPHQ13203 477 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 KRT71Q3SY84 523 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 Q71RC1 249 aaPredicted RBP13.89□□□□□ -0.19
USB1-203ENST00000539737 CROCCP2Q86T23 111 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 TRABD2AQ86V40 505 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 DMRTC2Q8IXT2 367 aaPredicted RBP13.89□□□□□ -0.19
USB1-203ENST00000539737 C4orf33Q8N1A6 199 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 L3MBTL4Q8NA19 623 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 UTP15Q8TED0 518 aaKnown RBP13.89□□□□□ -0.19
USB1-203ENST00000539737 ZNF483Q8TF39 744 aaPredicted RBP13.89□□□□□ -0.19
USB1-203ENST00000539737 ATP6V1E2Q96A05 226 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 PTCHD1Q96NR3 888 aa13.89□□□□□ -0.19
USB1-203ENST00000539737 ZNF559Q9BR84 538 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms