RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 AHNAKQ09666 5890 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 IGLV5-45A0A087WSX0 123 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 GOLGA6L7A0A1B0GV03 622 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 G3V2L1 256 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TXNL1O43396 289 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CTSVO60911 334 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 STK17BO94768 372 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 NADKO95544 446 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 H2BFMP0C1H6 154 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TNNI3P19429 210 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CCND3P30281 292 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 PRKAR2BP31323 418 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 FOXN2P32314 431 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TNFRSF4P43489 277 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CSRP3P50461 194 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ART1P52961 327 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 KDSRQ06136 332 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 GPM6BQ13491 265 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ITPK1Q13572 414 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 FASTKQ14296 549 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 PDK1Q15118 436 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SF3B4Q15427 424 aaKnown RBP eCLIP0.91□□□□□ -2.261e-6■■■■■ 55.4
HIF1A-204ENST00000539097 OR1C1Q15619 314 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SNAI3Q3KNW1 292 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 RABGAP1LQ5R372 815 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 FAM71F2Q6NXP2 309 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 UNQ6126/PRO20091Q6UXV3 157 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TCF24Q7RTU0 167 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ERASQ7Z444 233 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TAF8Q7Z7C8 310 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 FADS6Q8N9I5 356 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SYT14Q8NB59 555 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 KIAA0895Q8NCT3 520 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 OR2T12Q8NG77 320 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 LMO3Q8TAP4 145 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 GIPC3Q8TF64 312 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 PROX1Q92786 737 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 AP2M1Q96CW1 435 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ZG16BQ96DA0 208 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 THOC3Q96J01 351 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SFXN2Q96NB2 322 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ALKBH3Q96Q83 286 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TXN2Q99757 166 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TRAF4Q9BUZ4 470 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 LRRC2Q9BYS8 371 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TRIM9Q9C026 710 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 PARP12Q9H0J9 701 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 LRMDAQ9H2I8 198 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 KCNMB3Q9NPA1 279 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 GLRX2Q9NS18 164 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 NOCTQ9UK39 431 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 RARRES3Q9UL19 164 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SATB2Q9UPW6 733 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ENTPD4Q9Y227 616 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TMED7Q9Y3B3 224 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CHTOPQ9Y3Y2 248 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP0.91□□□□□ -2.267e-8■■■■■ 31
HIF1A-204ENST00000539097 SHROOM2Q13796 1616 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 PLEKHG2Q9H7P9 1386 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 BCORL1Q5H9F3 1711 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CHD4Q14839 1912 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TCF20Q9UGU0 1960 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SCRIBQ14160 1630 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ZCCHC11Q5TAX3 1644 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 A0A1W2PRB8 838 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 LRIT2A6NDA9 550 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 GAPDHSO14556 408 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ARHGEF9O43307 516 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 FGF17O60258 216 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SMPD2O60906 423 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 NGFP01138 241 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 KRT6AP02538 564 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TACSTD2P09758 323 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SBK2P0C263 348 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CLUP10909 449 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ODC1P11926 461 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 ITIH1P19827 911 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TMPOP42166 694 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 EPS15P42566 896 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 FHITP49789 147 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 LUMP51884 338 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 NLRP11P59045 1033 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 KRTAP10-7P60409 375 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 PDE1BQ01064 536 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 OC90Q02509 493 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 UBXN1Q04323 297 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 NPRL3Q12980 569 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 GK2Q14410 553 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 GPNMBQ14956 572 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 PRR4Q16378 134 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 MAJINQ3KP22 176 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TMEM30BQ3MIR4 351 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 LRIT3Q3SXY7 679 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 VWA2Q5GFL6 755 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 H3F3CQ6NXT2 135 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 STAC2Q6ZMT1 411 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 TRPM8Q7Z2W7 1104 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 CPEB2Q7Z5Q1 589 aaKnown RBP0.91□□□□□ -2.26
HIF1A-204ENST00000539097 LONP2Q86WA8 852 aa0.91□□□□□ -2.26
HIF1A-204ENST00000539097 SPATA2LQ8IUW3 424 aaPredicted RBP0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms