RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 KBTBD12Q3ZCT8 623 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 GXYLT1Q4G148 440 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 GRTP1Q5TC63 336 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 KHDRBS2Q5VWX1 349 aaKnown RBP11.57□□□□□ -0.56
VAMP1-206ENST00000538970 GRHL2Q6ISB3 625 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 OPN5Q6U736 354 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 C3orf62Q6ZUJ4 267 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 FAM47EQ6ZV65 393 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 ACAD11Q709F0 780 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 ISCA2Q86U28 154 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 CCDC71Q8IV32 467 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-206ENST00000538970 CTAGE3PQ8IX95 158 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 TMEM251Q8N6I4 163 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 OR7G3Q8NG95 312 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 OR5M3Q8NGP4 307 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 SMC6Q96SB8 1091 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 UCK2Q9BZX2 261 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 SACM1LQ9NTJ5 587 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 OPTCQ9UBM4 332 aa11.57□□□□□ -0.56
VAMP1-206ENST00000538970 GTF3C1Q12789 2109 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 A0A1B0GVC2 190 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 SUPT3HB4E1H0 165 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 UBXN8O00124 270 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 BCKDKO14874 412 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 SUPT3HO75486 399 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 IGKV3-11P04433 115 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 CELA3AP09093 270 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 COX7A2P14406 83 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 ACVR2AP27037 513 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 PMPCAQ10713 525 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 FOXO1Q12778 655 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 PIGGQ5H8A4 983 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 DEPDC1Q5TB30 811 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 DGAT2L6Q6ZPD8 337 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 RAPH1Q70E73 1250 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 CHSY3Q70JA7 882 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 TRILQ7L0X0 811 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 OR4N5Q8IXE1 308 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 C9orf40Q8IXQ3 194 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 RNF175Q8N4F7 328 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 PPM1NQ8N819 430 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 C7orf57Q8NEG2 295 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 SPATA4Q8NEY3 305 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 OR5M9Q8NGP3 310 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 NUBPLQ8TB37 319 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 CMTM7Q96FZ5 175 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 SENP5Q96HI0 755 aaPredicted RBP11.56□□□□□ -0.56
VAMP1-206ENST00000538970 DGAT2Q96PD7 388 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 SORBS1Q9BX66 1292 aaKnown RBP11.56□□□□□ -0.56
VAMP1-206ENST00000538970 OR51B5Q9H339 312 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 NMRAL1Q9HBL8 299 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 PRM3Q9NNZ6 103 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 SH2D2AQ9NP31 389 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 KCNJ16Q9NPI9 418 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 MS4A12Q9NXJ0 267 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 TUBA8Q9NY65 449 aaPredicted RBP11.56□□□□□ -0.56
VAMP1-206ENST00000538970 PYCARDQ9ULZ3 195 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 ATG4BQ9Y4P1 393 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 FAM215AQ9Y5M1 114 aa11.56□□□□□ -0.56
VAMP1-206ENST00000538970 FIGNL2A6NMB9 653 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 FOXO6A8MYZ6 492 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 HRKO00198 91 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 PLPP1O14494 284 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 AQP7O14520 342 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 NADKO95544 446 aaPredicted RBP11.55□□□□□ -0.56
VAMP1-206ENST00000538970 P04436 131 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 LTA4HP09960 611 aaKnown RBP11.55□□□□□ -0.56
VAMP1-206ENST00000538970 MTHFD2P13995 350 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 EPB42P16452 691 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 CRABP2P29373 138 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 PLIN5Q00G26 463 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 TNFRSF17Q02223 184 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 FOLH1Q04609 750 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 C2orf54Q08AI8 447 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 ASPHQ12797 758 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 SLAMF1Q13291 335 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 DDX39BQ13838 428 aaKnown RBP11.55□□□□□ -0.56
VAMP1-206ENST00000538970 ZNF791Q3KP31 576 aaPredicted RBP11.55□□□□□ -0.56
VAMP1-206ENST00000538970 RTL6Q6ICC9 239 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 OR4C11Q6IEV9 310 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 ZNF585AQ6P3V2 769 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 ADGRD1Q6QNK2 874 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 LYPD8Q6UX82 237 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 MAATS1Q7Z4T9 603 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 TBC1D1Q86TI0 1168 aaPredicted RBP11.55□□□□□ -0.56
VAMP1-206ENST00000538970 DMRTC2Q8IXT2 367 aaPredicted RBP11.55□□□□□ -0.56
VAMP1-206ENST00000538970 ZCCHC7Q8N3Z6 543 aaKnown RBP11.55□□□□□ -0.56
VAMP1-206ENST00000538970 HUS1BQ8NHY5 278 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 SLC22A8Q8TCC7 542 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 PPWD1Q96BP3 646 aaKnown RBP11.55□□□□□ -0.56
VAMP1-206ENST00000538970 FBXL20Q96IG2 436 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 TTYH2Q9BSA4 534 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 RPF2Q9H7B2 306 aaKnown RBP11.55□□□□□ -0.56
VAMP1-206ENST00000538970 SEMA4BQ9NPR2 832 aaPredicted RBP11.55□□□□□ -0.56
VAMP1-206ENST00000538970 DMRT3Q9NQL9 472 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 TNFRSF10DQ9UBN6 386 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 ADGRE2Q9UHX3 823 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 PHF11Q9UIL8 331 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 TSC22D4Q9Y3Q8 395 aa11.55□□□□□ -0.56
VAMP1-206ENST00000538970 NAV3Q8IVL0 2385 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms