RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 PPT2Q9UMR5 302 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 ERVK-11Q9UQG0 969 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 NOTCH2Q04721 2471 aa13.91□□□□□ -0.18
RAB40B-202ENST00000538809 SYNDIG1LA6NDD5 238 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 PRSS44E7EML9 344 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 TFECO14948 347 aaPredicted RBP13.9□□□□□ -0.18
RAB40B-202ENST00000538809 EEDO75530 441 aaKnown RBP13.9□□□□□ -0.18
RAB40B-202ENST00000538809 OR6B1O95007 311 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 PTGER1P34995 402 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 SOX3P41225 446 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 NEK2P51955 445 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 HK2P52789 917 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 CASP6P55212 293 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 IGLV3-21P80748 117 aaPredicted RBP13.9□□□□□ -0.18
RAB40B-202ENST00000538809 SERTAD2Q14140 314 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 SLC29A2Q14542 456 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 FAM219BQ5XKK7 198 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 MRM1Q6IN84 353 aaKnown RBP13.9□□□□□ -0.18
RAB40B-202ENST00000538809 HSDL2Q6YN16 418 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 NCCRP1Q6ZVX7 275 aaPredicted RBP13.9□□□□□ -0.18
RAB40B-202ENST00000538809 RPS27LQ71UM5 84 aaKnown RBP13.9□□□□□ -0.18
RAB40B-202ENST00000538809 ZCCHC7Q8N3Z6 543 aaKnown RBP13.9□□□□□ -0.18
RAB40B-202ENST00000538809 MORN4Q8NDC4 146 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 DOK4Q8TEW6 326 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 ASB15Q8WXK1 588 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 REPS1Q96D71 796 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 MTFMTQ96DP5 389 aaKnown RBP13.9□□□□□ -0.18
RAB40B-202ENST00000538809 MTBPQ96DY7 904 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 CENPKQ9BS16 269 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 YARS2Q9Y2Z4 477 aaKnown RBP13.9□□□□□ -0.18
RAB40B-202ENST00000538809 ATG4BQ9Y4P1 393 aa13.9□□□□□ -0.18
RAB40B-202ENST00000538809 PKDREJQ9NTG1 2253 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 ARHGAP21Q5T5U3 1957 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 A0A0G2JMM0 328 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 A0A1B0GTL3 188 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 A0A1W2PPB8 328 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 A0A1W2PRS3 328 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 A8MT66 165 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 A8MVJ9 347 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 KIR3DP1A8MWS1 328 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 FOXE1O00358 373 aaPredicted RBP13.89□□□□□ -0.19
RAB40B-202ENST00000538809 ASNA1O43681 348 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 PEX1O43933 1283 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 TMPRSS11DO60235 418 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 SMIM24O75264 130 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 CLDN9O95484 217 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 ABOP16442 354 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 BSGP35613 385 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 CCNG1P51959 295 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 FOLH1Q04609 750 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 CUL3Q13618 768 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.89□□□□□ -0.19
RAB40B-202ENST00000538809 GGTA1PQ4G0N0 100 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 KRTCAP3Q53RY4 240 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 IL20RBQ6UXL0 311 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 DGAT2L6Q6ZPD8 337 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 GPR180Q86V85 440 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 GHDCQ8N2G8 530 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 ZNF721Q8TF20 911 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 ZNF483Q8TF39 744 aaPredicted RBP13.89□□□□□ -0.19
RAB40B-202ENST00000538809 ATP6V1E2Q96A05 226 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 PPWD1Q96BP3 646 aaKnown RBP13.89□□□□□ -0.19
RAB40B-202ENST00000538809 DGAT2Q96PD7 388 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 RASL10BQ96S79 203 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 RPF2Q9H7B2 306 aaKnown RBP13.89□□□□□ -0.19
RAB40B-202ENST00000538809 DEPPQ9NTK1 212 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 HPF1Q9NWY4 346 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 TMEM216Q9P0N5 145 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 MYOTQ9UBF9 498 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 PHF11Q9UIL8 331 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 ZNF835Q9Y2P0 537 aa13.89□□□□□ -0.19
RAB40B-202ENST00000538809 A0A0A6YYD5 115 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 ARHGAP10A1A4S6 786 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 GLOD5A6NK44 160 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 G3V3Y1 287 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 KLRC4-KLRK1H3BQV0 150 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 HRKO00198 91 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 HS6ST1O60243 411 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 CDC40O60508 579 aaKnown RBP eCLIP13.88□□□□□ -0.19
RAB40B-202ENST00000538809 ZNF354AO60765 605 aaPredicted RBP13.88□□□□□ -0.19
RAB40B-202ENST00000538809 GBAP04062 536 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 ESRRAP11474 423 aaPredicted RBP13.88□□□□□ -0.19
RAB40B-202ENST00000538809 COX7A2P14406 83 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 PTX3P26022 381 aaPredicted RBP13.88□□□□□ -0.19
RAB40B-202ENST00000538809 GRNP28799 593 aaKnown RBP13.88□□□□□ -0.19
RAB40B-202ENST00000538809 TNFRSF8P28908 595 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 STT3AP46977 705 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 RNF4P78317 190 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 ADORA2A-AS1P86434 159 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 LGSNQ5TDP6 509 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 C3P1Q6ZMU1 363 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 Q6ZPB1 254 aaPredicted RBP13.88□□□□□ -0.19
RAB40B-202ENST00000538809 FGD2Q7Z6J4 655 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 MRGPRGQ86SM5 289 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 LCA5Q86VQ0 697 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 SPPL2CQ8IUH8 684 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 CHERPQ8IWX8 916 aaKnown RBP13.88□□□□□ -0.19
RAB40B-202ENST00000538809 PSD4Q8NDX1 1056 aa13.88□□□□□ -0.19
RAB40B-202ENST00000538809 DDX31Q9H8H2 851 aaKnown RBP13.88□□□□□ -0.19
RAB40B-202ENST00000538809 TIMMDC1Q9NPL8 285 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms