RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SFXN1Q9H9B4 322 aa23.64■■□□□ 1.38
RAB40C-204ENST00000538492 A4GALTQ9NPC4 353 aa23.64■■□□□ 1.38
RAB40C-204ENST00000538492 IGKV1-8A0A0C4DH67 115 aa23.64■■□□□ 1.37
RAB40C-204ENST00000538492 M0R082 166 aa23.64■■□□□ 1.37
RAB40C-204ENST00000538492 HMGN4O00479 90 aa23.64■■□□□ 1.37
RAB40C-204ENST00000538492 TIGD6Q17RP2 521 aa23.64■■□□□ 1.37
RAB40C-204ENST00000538492 TBC1D25Q3MII6 688 aa23.64■■□□□ 1.37
RAB40C-204ENST00000538492 VANGL1Q8TAA9 524 aaPredicted RBP23.64■■□□□ 1.37
RAB40C-204ENST00000538492 SLC38A4Q969I6 547 aa23.64■■□□□ 1.37
RAB40C-204ENST00000538492 VMP1Q96GC9 406 aa23.64■■□□□ 1.37
RAB40C-204ENST00000538492 QRFPRQ96P65 431 aa23.64■■□□□ 1.37
RAB40C-204ENST00000538492 TEFMQ96QE5 360 aaKnown RBP23.64■■□□□ 1.37
RAB40C-204ENST00000538492 MS4A12Q9NXJ0 267 aa23.64■■□□□ 1.37
RAB40C-204ENST00000538492 PRKRAO75569 313 aaKnown RBP23.63■■□□□ 1.37
RAB40C-204ENST00000538492 PTGER1P34995 402 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 TBCEQ15813 527 aaPredicted RBP23.63■■□□□ 1.37
RAB40C-204ENST00000538492 LEXMQ3ZCV2 418 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 MLIPQ5VWP3 458 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 ZNF554Q86TJ5 538 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 RBM45Q8IUH3 476 aaKnown RBP23.63■■□□□ 1.37
RAB40C-204ENST00000538492 APOBEC4Q8WW27 367 aaKnown RBP23.63■■□□□ 1.37
RAB40C-204ENST00000538492 ZHX1-C8orf76Q96EF9 292 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 ZBTB20Q9HC78 741 aaPredicted RBP23.63■■□□□ 1.37
RAB40C-204ENST00000538492 MOSPD1Q9UJG1 213 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 DNMT3AQ9Y6K1 912 aaPredicted RBP23.63■■□□□ 1.37
RAB40C-204ENST00000538492 CLDN24A6NM45 220 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 SEMA7AO75326 666 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 MFN2O95140 757 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 SERPINB10P48595 397 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 CCT3P49368 545 aaKnown RBP23.63■■□□□ 1.37
RAB40C-204ENST00000538492 MAPK11Q15759 364 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 STX19Q8N4C7 294 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 DENND6BQ8NEG7 585 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 CHPT1Q8WUD6 406 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 ZBED6CLQ96FA7 236 aaPredicted RBP23.63■■□□□ 1.37
RAB40C-204ENST00000538492 FKBP14Q9NWM8 211 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 ACSL5Q9ULC5 683 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 ZFR2Q9UPR6 939 aaKnown RBP23.63■■□□□ 1.37
RAB40C-204ENST00000538492 CKAP5Q14008 2032 aa23.63■■□□□ 1.37
RAB40C-204ENST00000538492 GLOD5A6NK44 160 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 A8MVJ9 347 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 CLK1P49759 484 aaKnown RBP23.62■■□□□ 1.37
RAB40C-204ENST00000538492 ST3GAL4Q11206 333 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 OR5D16Q8NGK9 328 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 FCGR1BQ92637 280 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 OTUB1Q96FW1 271 aaPredicted RBP23.62■■□□□ 1.37
RAB40C-204ENST00000538492 WFDC6Q9BQY6 131 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 SERHL2Q9H4I8 314 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 IGFLR1Q9H665 355 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 GDE1Q9NZC3 331 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 B3GNT3Q9Y2A9 372 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 OR52A4PA6NMU1 304 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 ANHXE9PGG2 379 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 CBFA2T3O75081 653 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 HOXB3P14651 431 aaPredicted RBP23.62■■□□□ 1.37
RAB40C-204ENST00000538492 CHMP24386 653 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 SSR2P43308 183 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 C2orf27AQ580R0 203 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 COLEC12Q5KU26 742 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 OR4C11Q6IEV9 310 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 DEF8Q6ZN54 512 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 DPH7Q9BTV6 452 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 BTBD2Q9BX70 525 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 AICDAQ9GZX7 198 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 RSPH9Q9H1X1 276 aaPredicted RBP23.62■■□□□ 1.37
RAB40C-204ENST00000538492 KLHL31Q9H511 634 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 TAS2R16Q9NYV7 291 aa23.62■■□□□ 1.37
RAB40C-204ENST00000538492 AIREO43918 545 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 TBX19O60806 448 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 OLIG3Q7RTU3 272 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 OR2A1Q8NGT9 310 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 ZNF675Q8TD23 568 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 CAMK1GQ96NX5 476 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 WDR12Q9GZL7 423 aaKnown RBP23.61■■□□□ 1.37
RAB40C-204ENST00000538492 KCND3Q9UK17 655 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 DOLKQ9UPQ8 538 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 WBP11Q9Y2W2 641 aaKnown RBP23.61■■□□□ 1.37
RAB40C-204ENST00000538492 SNRNP200O75643 2136 aaKnown RBP23.61■■□□□ 1.37
RAB40C-204ENST00000538492 GADD45AP24522 165 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 FRKP42685 505 aaPredicted RBP23.61■■□□□ 1.37
RAB40C-204ENST00000538492 CDC42P60953 191 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 PRDX1Q06830 199 aaKnown RBP23.61■■□□□ 1.37
RAB40C-204ENST00000538492 SYPL1Q16563 259 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 PERM1Q5SV97 790 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 NDUFAF5Q5TEU4 345 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 ZNF770Q6IQ21 691 aaPredicted RBP23.61■■□□□ 1.37
RAB40C-204ENST00000538492 B3GNT7Q8NFL0 401 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 KXD1Q9BQD3 176 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 SLIRPQ9GZT3 109 aaKnown RBP23.61■■□□□ 1.37
RAB40C-204ENST00000538492 DNAAF2Q9NVR5 837 aaKnown RBP23.61■■□□□ 1.37
RAB40C-204ENST00000538492 ATG2AQ2TAZ0 1938 aa23.61■■□□□ 1.37
RAB40C-204ENST00000538492 SLC28A2O43868 658 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 PTHP01270 115 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 OR12D1P0DN82 309 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 BMP4P12644 408 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 SERPINB1P30740 379 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 TRIM23P36406 574 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 SEC13P55735 322 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 KRT33BQ14525 404 aa23.6■■□□□ 1.37
RAB40C-204ENST00000538492 SEC23BQ15437 767 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms