RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 LRRC70Q7Z2Q7 622 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 PRSS42Q7Z5A4 293 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 TRIM73Q86UV7 250 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 THOC6Q86W42 341 aaKnown RBP4.11□□□□□ -1.75
SNHG1-208ENST00000538266 KMT5CQ86Y97 462 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 MYLK4Q86YV6 388 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-208ENST00000538266 RASGRP3Q8IV61 690 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 SLC22A9Q8IVM8 553 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.11□□□□□ -1.753e-7■■■■■ 36.2
SNHG1-208ENST00000538266 ARHGAP24Q8N264 748 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 CHCHD4Q8N4Q1 142 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 PTGR2Q8N8N7 351 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-208ENST00000538266 DCBLD1Q8N8Z6 715 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 BANPQ8N9N5 519 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 LMNTD1Q8N9Z9 388 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 LINC01555Q8NAE3 123 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 PDPRQ8NCN5 879 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 OR2L3Q8NG85 312 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 RDH11Q8TC12 318 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 DENND1AQ8TEH3 1009 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 PPP4R1Q8TF05 950 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 C10orf82Q8WW14 230 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 RAB24Q969Q5 203 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 RERGQ96A58 199 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-208ENST00000538266 PYCR2Q96C36 320 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 RHBDF1Q96CC6 855 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 PHF21BQ96EK2 531 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 NAF1Q96HR8 494 aaKnown RBP4.11□□□□□ -1.75
SNHG1-208ENST00000538266 CLPTM1LQ96KA5 538 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 GPR78Q96P69 363 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 OR2A14Q96R47 310 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 ATOH8Q96SQ7 321 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 TSC22D3Q99576 134 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 NRTNQ99748 197 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 MAP3K3Q99759 626 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 SH3GL3Q99963 347 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 PAIP2Q9BPZ3 127 aaKnown RBP4.11□□□□□ -1.75
SNHG1-208ENST00000538266 TUBB6Q9BUF5 446 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 VCXQ9H320 206 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 PDE7BQ9NP56 450 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 MLXIPLQ9NP71 852 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 MRPS30Q9NP92 439 aaKnown RBP4.11□□□□□ -1.75
SNHG1-208ENST00000538266 SAR1AQ9NR31 198 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 DNAJC11Q9NVH1 559 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 AURKAIP1Q9NWT8 199 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-208ENST00000538266 SPHK1Q9NYA1 384 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 ZIM2Q9NZV7 527 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 TMEM216Q9P0N5 145 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 TMEM9Q9P0T7 183 aa4.11□□□□□ -1.75
SNHG1-208ENST00000538266 RUVBL1Q9Y265 456 aaKnown RBP4.11□□□□□ -1.75
SNHG1-208ENST00000538266 RP1P56715 2156 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 WDFY4Q6ZS81 3184 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 CCDC187A0A096LP49 1063 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 IGHV5-51A0A0C4DH38 117 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 A0A1W2PPV9 198 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 SLC9B1P1A6NJY1 282 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 EFCAB7A8K855 629 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 A8MT66 165 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 STX16-NPEPL1H3BU86 382 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 K7EPI3 171 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 STX16O14662 325 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 TM9SF1O15321 606 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 NVLO15381 856 aaKnown RBP4.1□□□□□ -1.75
SNHG1-208ENST00000538266 KLK8O60259 260 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 PLIN3O60664 434 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 SPAG7O75391 227 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 OTCP00480 354 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 FESP07332 822 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 CDH1P12830 882 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 CPA3P15088 417 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 ST6GAL1P15907 406 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 CREB1P16220 341 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 NELFEP18615 380 aaKnown RBP4.1□□□□□ -1.75
SNHG1-208ENST00000538266 GNAZP19086 355 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 ATP5F1P24539 256 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-208ENST00000538266 CXCR2P25025 360 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 RBMS1P29558 406 aaKnown RBP4.1□□□□□ -1.75
SNHG1-208ENST00000538266 PEBP1P30086 187 aaKnown RBP4.1□□□□□ -1.75
SNHG1-208ENST00000538266 GGT5P36269 586 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 VHLP40337 213 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 PEX19P40855 299 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 GDF5P43026 501 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 AGTR2P50052 363 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 PDX1P52945 283 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 CLDN6P56747 220 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 CTXN1P60606 82 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 RAP2BP61225 183 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 NAA20P61599 178 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 HERVK_113P63132 956 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 MXRA7P84157 204 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 ACY1Q03154 408 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 CFHR1Q03591 330 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 SLC18A2Q05940 514 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 PRDX1Q06830 199 aaKnown RBP4.1□□□□□ -1.75
SNHG1-208ENST00000538266 ZFP36L1Q07352 338 aaKnown RBP4.1□□□□□ -1.75
SNHG1-208ENST00000538266 KLC1Q07866 573 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 CDC16Q13042 620 aa4.1□□□□□ -1.75
SNHG1-208ENST00000538266 TARDBPQ13148 414 aaKnown RBP eCLIP4.1□□□□□ -1.75
SNHG1-208ENST00000538266 KCNAB1Q14722 419 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms