RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 CCDC149Q6ZUS6 474 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 IKBIPQ70UQ0 350 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 PHC2Q8IXK0 858 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 FIBINQ8TAL6 211 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 CREB3L4Q8TEY5 395 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 C16orf78Q8WTQ4 265 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 APOBEC4Q8WW27 367 aaKnown RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 AP3S1Q92572 193 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 ZC3HAV1LQ96H79 300 aaKnown RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 FRMD6Q96NE9 622 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 TEFMQ96QE5 360 aaKnown RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 TTYH2Q9BSA4 534 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 WRAP53Q9BUR4 548 aaKnown RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 EFCAB11Q9BUY7 163 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 ISYNA1Q9NPH2 558 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 TIGARQ9NQ88 270 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 ACOXLQ9NUZ1 547 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 DNAJC27Q9NZQ0 273 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 B4GALT6Q9UBX8 382 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 KLHL21Q9UJP4 597 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 ACSL6Q9UKU0 697 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 RAB23Q9ULC3 237 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 DIMT1Q9UNQ2 313 aaKnown RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 MAP4K5Q9Y4K4 846 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 KCNE2Q9Y6J6 123 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 PTPRSQ13332 1948 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 A0A1W2PRB8 838 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 IRGMA1A4Y4 181 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 STK25O00506 426 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 LILRB3O75022 631 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 PDE9AO76083 593 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 RAB36O95755 333 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 HLA-DQB1P01920 261 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 CKMP06732 381 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 HBQ1P09105 142 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 CHRNB1P11230 501 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 CYP2A6P11509 494 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 CPEP16870 476 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 ELAVL4P26378 380 aaKnown RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 ERP29P30040 261 aaKnown RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 SOAT1P35610 550 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 BDKRB1P46663 353 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 SLC9A3P48764 834 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 MNX1P50219 401 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 XKP51811 444 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 SMIM11AP58511 58 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 WDR5P61964 334 aaKnown RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 DEFB103AP81534 67 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 CYP4F8P98187 520 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 C19orf57Q0VDD7 668 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 SLC5A12Q1EHB4 618 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 MPEG1Q2M385 716 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 SLC25A30Q5SVS4 291 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 DCST1Q5T197 706 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 DDI2Q5TDH0 399 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 ADNP2Q6IQ32 1131 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 SYCE2Q6PIF2 218 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 COMMD6Q7Z4G1 85 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 TMCO2Q7Z6W1 182 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 TMPRSS11BQ86T26 416 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 PLCZ1Q86YW0 608 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 FBXO15Q8NCQ5 510 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 ZFAND1Q8TCF1 268 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 JPH3Q8WXH2 748 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 BHMTQ93088 406 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 PDXPQ96GD0 296 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 PPP1R16AQ96I34 528 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 SLC6A18Q96N87 628 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 IL4I1Q96RQ9 567 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 C11orf54Q9H0W9 315 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 MMP28Q9H239 520 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 PRM3Q9NNZ6 103 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 ABCB9Q9NP78 766 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 A4GALTQ9NPC4 353 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 DMRT3Q9NQL9 472 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 TMEM39AQ9NV64 488 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 TXNL4BQ9NX01 149 aaKnown RBP11.57□□□□□ -0.56
CPSF7-218ENST00000537641 CFAP97Q9P2B7 532 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 DKK3Q9UBP4 350 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 CLEC2DQ9UHP7 191 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 HCN2Q9UL51 889 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 SNX11Q9Y5W9 270 aa11.57□□□□□ -0.56
CPSF7-218ENST00000537641 TRBV4-1A0A0J9YWV2 114 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 FABP12A6NFH5 140 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 POLR1CO15160 346 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-218ENST00000537641 NDUFB5O43674 189 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 EFCAB14O75071 495 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 PTBP1P26599 531 aaKnown RBP eCLIP11.56□□□□□ -0.56
CPSF7-218ENST00000537641 CD70P32970 193 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 GSTM5P46439 218 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 CASP9P55211 416 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 GALK2Q01415 458 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 HNRNPA0Q13151 305 aaKnown RBP11.56□□□□□ -0.56
CPSF7-218ENST00000537641 HEPACAMQ14CZ8 416 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 TAB1Q15750 504 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 NDUFA9Q16795 377 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 ZNF648Q5T619 568 aaPredicted RBP11.56□□□□□ -0.56
CPSF7-218ENST00000537641 LCN1P1Q5VSP4 162 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 GAREM2Q75VX8 874 aa11.56□□□□□ -0.56
CPSF7-218ENST00000537641 ARMCX6Q7L4S7 300 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms