RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 SSBP2P81877 361 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-203ENST00000537024 SPAG1Q07617 926 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 ACSM1Q08AH1 577 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 TRDNQ13061 729 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 GAGE1Q13065 139 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 GAGE4Q13068 117 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 PLA2G7Q13093 441 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 PTK6Q13882 451 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 C16orf72Q14CZ0 275 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 VWC2Q2TAL6 325 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 MPP7Q5T2T1 576 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 RNASEH2BQ5TBB1 312 aaKnown RBP3.72□□□□□ -1.81
SNHG1-203ENST00000537024 WSCD1Q658N2 575 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 LINGO4Q6UY18 593 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 APLFQ8IW19 511 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-203ENST00000537024 CCDC83Q8IWF9 413 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 CHERPQ8IWX8 916 aaKnown RBP3.72□□□□□ -1.81
SNHG1-203ENST00000537024 SLC22A18ASQ8N1D0 253 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 PAPD5Q8NDF8 572 aaKnown RBP3.72□□□□□ -1.81
SNHG1-203ENST00000537024 ST6GALNAC3Q8NDV1 305 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 GANCQ8TET4 914 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 ZFAND2BQ8WV99 257 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 ROBO4Q8WZ75 1007 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 SLAMF9Q96A28 289 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 PNPLA2Q96AD5 504 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 C18orf12Q96KH6 178 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 FAM81BQ96LP2 452 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 RMDN2Q96LZ7 410 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 OLFM1Q99784 485 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 FNDC11Q9BVV2 318 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 SPRY4Q9C004 299 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 DCLK3Q9C098 648 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 CCSER1Q9C0I3 900 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 SPRTNQ9H040 489 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-203ENST00000537024 ZMYND12Q9H0C1 365 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 WNT5BQ9H1J7 359 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 CHCHD3Q9NX63 227 aaKnown RBP3.72□□□□□ -1.81
SNHG1-203ENST00000537024 DPP3Q9NY33 737 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 DNAJB9Q9UBS3 223 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 CYTH4Q9UIA0 394 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 UBQLN1Q9UMX0 589 aaKnown RBP3.72□□□□□ -1.81
SNHG1-203ENST00000537024 MGAM2Q2M2H8 2515 aa3.72□□□□□ -1.81
SNHG1-203ENST00000537024 AKAP6Q13023 2319 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 NCOA6Q14686 2063 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-203ENST00000537024 TTC26A0AVF1 554 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 HTR3EA5X5Y0 456 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 ZSCAN5CA6NGD5 496 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-203ENST00000537024 PRAMEF26H0Y7S4 382 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 H0YAE9 185 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 TRIM77I1YAP6 450 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 C19orf84I3L1E1 186 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 TO15178 435 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 AQP9O43315 295 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 XRCC3O43542 346 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 DPM1O60762 260 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 MED24O75448 989 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 LYPLA2O95372 231 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 STSP08842 583 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 CXCL8P10145 99 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 PSG1P11464 419 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 ATP6V1B1P15313 513 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 ABATP80404 500 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 COG7P83436 770 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 MZT1Q08AG7 82 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 KLF9Q13886 244 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-203ENST00000537024 CST6Q15828 149 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 POM121L1PQ3SYA9 428 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 KLHL26Q53HC5 615 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 TDRD12Q587J7 1177 aaKnown RBP3.71□□□□□ -1.82
SNHG1-203ENST00000537024 ZNF542PQ5EBM4 170 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 DCAF10Q5QP82 559 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 FAM69BQ5VUD6 431 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 C9orf57Q5W0N0 161 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 FAM198BQ6UWH4 519 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 MSANTD1Q6ZTZ1 278 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 C11orf57Q6ZUT1 292 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-203ENST00000537024 SPATA21Q7Z572 469 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 SPATA19Q7Z5L4 167 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 TMEM135Q86UB9 458 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 FJX1Q86VR8 437 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 TRIM69Q86WT6 500 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 MAP7D3Q8IWC1 876 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 CCDC170Q8IYT3 715 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 IQCKQ8N0W5 287 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 SIX6OS1Q8N1H7 587 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 C1orf52Q8N6N3 182 aaKnown RBP3.71□□□□□ -1.82
SNHG1-203ENST00000537024 RBMXL3Q8N7X1 1067 aaKnown RBP3.71□□□□□ -1.82
SNHG1-203ENST00000537024 ACBD4Q8NC06 268 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 OR5R1Q8NH85 324 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 SLC44A1Q8WWI5 657 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 TMEM158Q8WZ71 300 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 EXT2Q93063 718 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 FAM131CQ96AQ9 280 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 SPSB1Q96BD6 273 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 SPDL1Q96EA4 605 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 OR1F2PQ96R84 312 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 CSF3RQ99062 836 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 DDA1Q9BW61 102 aa3.71□□□□□ -1.82
SNHG1-203ENST00000537024 SF3B5Q9BWJ5 86 aaKnown RBP3.71□□□□□ -1.82
SNHG1-203ENST00000537024 CALN1Q9BXU9 219 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms