RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 ZW10O43264 779 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 ERI3O43414 337 aaKnown RBP12.87□□□□□ -0.35
SMG6-203ENST00000536871 TFPTP0C1Z6 253 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 F3P13726 295 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 IL7RP16871 459 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 ATP5A1P25705 553 aaKnown RBP12.87□□□□□ -0.35
SMG6-203ENST00000536871 BMP8BP34820 402 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 RABIFP47224 123 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 IL1RL1Q01638 556 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 SLAMF1Q13291 335 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 PRSS53Q2L4Q9 553 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 CTU2Q2VPK5 515 aaKnown RBP12.87□□□□□ -0.35
SMG6-203ENST00000536871 GALNT5Q7Z7M9 940 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 PARP8Q8N3A8 854 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 LINC00471Q8N535 108 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 ACOT4Q8N9L9 421 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 TMEM145Q8NBT3 493 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 NT5CQ8TCD5 201 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 SLC38A5Q8WUX1 472 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 NR4A3Q92570 626 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 C12orf43Q96C57 262 aaKnown RBP12.87□□□□□ -0.35
SMG6-203ENST00000536871 SLC35G5Q96KT7 338 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 DUSP21Q9H596 190 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 PRDM7Q9NQW5 492 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 CD207Q9UJ71 328 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 HCN4Q9Y3Q4 1203 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 PLEKHM1Q9Y4G2 1056 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 POM121BA6NF01 834 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 HAT1O14929 419 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 MPZL2O60487 215 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 DIRAS1O95057 198 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 OXSR1O95747 527 aaPredicted RBP12.87□□□□□ -0.35
SMG6-203ENST00000536871 IGLV3-19P01714 112 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 NDUFV2P19404 249 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 MPIP34949 423 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 LTBRP36941 435 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 YAP1P46937 504 aaKnown RBP12.87□□□□□ -0.35
SMG6-203ENST00000536871 CLK3P49761 638 aaKnown RBP12.87□□□□□ -0.35
SMG6-203ENST00000536871 TPMTP51580 245 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 CCR5P51681 352 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 PRR5P85299 388 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 ILF3Q12906 894 aaKnown RBP eCLIP12.87□□□□□ -0.353e-6■■■■□ 19.4
SMG6-203ENST00000536871 HSPB3Q12988 150 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 SIM2Q14190 667 aaPredicted RBP12.87□□□□□ -0.35
SMG6-203ENST00000536871 NEDD8Q15843 81 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 TOR1AIP1Q5JTV8 583 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 MLIPQ5VWP3 458 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 DHRS4L2Q6PKH6 230 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 ZNF605Q86T29 641 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 FAM124AQ86V42 546 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 PAQR7Q86WK9 346 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 HORMAD2Q8N7B1 307 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 BBS10Q8TAM1 723 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 BMFQ96LC9 184 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 AMDHD1Q96NU7 426 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 MAPKAP1Q9BPZ7 522 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 BTBD2Q9BX70 525 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 SLC6A17Q9H1V8 727 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 FANCEQ9HB96 536 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 BCL2L10Q9HD36 194 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 POLMQ9NP87 494 aaPredicted RBP12.87□□□□□ -0.35
SMG6-203ENST00000536871 SLAMF7Q9NQ25 335 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 FAIMQ9NVQ4 179 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 TEX10Q9NXF1 929 aaPredicted RBP12.87□□□□□ -0.35
SMG6-203ENST00000536871 CALML5Q9NZT1 146 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 TBC1D29Q9UFV1 150 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 PHF11Q9UIL8 331 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 TESMINQ9Y4I5 508 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 ASB4Q9Y574 426 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 KLK4Q9Y5K2 254 aa12.87□□□□□ -0.35
SMG6-203ENST00000536871 PRAMEF26H0Y7S4 382 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 TNFSF14O43557 240 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 MITFO75030 526 aaPredicted RBP12.86□□□□□ -0.35
SMG6-203ENST00000536871 CCNB2O95067 398 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 GADD45GO95257 159 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 OPN1SWP03999 348 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 HNRNPCP07910 306 aaKnown RBP eCLIP12.86□□□□□ -0.353e-7■■□□□ 12.3
SMG6-203ENST00000536871 SLC35G6P0C7Q6 338 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 PORP16435 677 aaPredicted RBP12.86□□□□□ -0.35
SMG6-203ENST00000536871 CSNK2A2P19784 350 aaPredicted RBP12.86□□□□□ -0.35
SMG6-203ENST00000536871 ACTR1BP42025 376 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 CRISP3P54108 245 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 SRP54P61011 504 aaKnown RBP12.86□□□□□ -0.35
SMG6-203ENST00000536871 ACTR1AP61163 376 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 HYAL2Q12891 473 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 MAD2L1BPQ15013 274 aaPredicted RBP12.86□□□□□ -0.35
SMG6-203ENST00000536871 CEBPEQ15744 281 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 TJAP1Q5JTD0 557 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 COLEC12Q5KU26 742 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 XAF1Q6GPH4 301 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 P3H2Q8IVL5 708 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 BPIFB6Q8NFQ5 453 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 PHF10Q8WUB8 498 aaKnown RBP12.86□□□□□ -0.35
SMG6-203ENST00000536871 C17orf50Q8WW18 174 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 MUL1Q969V5 352 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 ITPKCQ96DU7 683 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 TMEM19Q96HH6 336 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 ZNF354BQ96LW1 612 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 GLIPR2Q9H4G4 154 aa12.86□□□□□ -0.35
SMG6-203ENST00000536871 TRIM45Q9H8W5 580 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms