RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 AICDAQ9GZX7 198 aa6.61□□□□□ -1.35
YBX3-206ENST00000536823 EHD1Q9H4M9 534 aa6.61□□□□□ -1.35
YBX3-206ENST00000536823 ALG9Q9H6U8 611 aa6.61□□□□□ -1.35
YBX3-206ENST00000536823 CNOT10Q9H9A5 744 aaKnown RBP6.61□□□□□ -1.35
YBX3-206ENST00000536823 CLK4Q9HAZ1 481 aaKnown RBP6.61□□□□□ -1.35
YBX3-206ENST00000536823 LANCL2Q9NS86 450 aa6.61□□□□□ -1.35
YBX3-206ENST00000536823 DNAJC11Q9NVH1 559 aa6.61□□□□□ -1.35
YBX3-206ENST00000536823 GPRC5BQ9NZH0 403 aa6.61□□□□□ -1.35
YBX3-206ENST00000536823 NUDT4Q9NZJ9 180 aa6.61□□□□□ -1.35
YBX3-206ENST00000536823 CD274Q9NZQ7 290 aa6.61□□□□□ -1.35
YBX3-206ENST00000536823 COPG2Q9UBF2 871 aa6.61□□□□□ -1.35
YBX3-206ENST00000536823 C19orf25Q9UFG5 118 aaPredicted RBP6.61□□□□□ -1.35
YBX3-206ENST00000536823 PTBP2Q9UKA9 531 aaKnown RBP6.61□□□□□ -1.35
YBX3-206ENST00000536823 VPS4AQ9UN37 437 aa6.61□□□□□ -1.35
YBX3-206ENST00000536823 DYTNA2CJ06 578 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 MAGEB17A8MXT2 336 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 KIF2AO00139 706 aaPredicted RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 CLGNO14967 610 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 TAPBPO15533 448 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 CHST10O43529 356 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 KERAO60938 352 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 STK16O75716 305 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 SEC24DO94855 1032 aaPredicted RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 S100BP04271 92 aaPredicted RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 CD3EP07766 207 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 UQCRHP07919 91 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 FHP07954 510 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 LTA4HP09960 611 aaKnown RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 SMIM10L1P0DMW3 83 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 RNH1P13489 461 aaKnown RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 ICAM2P13598 275 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 JAK1P23458 1154 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 HSPA7P48741 367 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 STXBP1P61764 594 aaKnown RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 SRSF1Q07955 248 aaKnown RBP eCLIP6.6□□□□□ -1.35
YBX3-206ENST00000536823 DLG1Q12959 904 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 BMPR2Q13873 1038 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 ZNF169Q14929 603 aaPredicted RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 PDK4Q16654 411 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 FBXO48Q5FWF7 155 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 TOR1AIP1Q5JTV8 583 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 UBAP2Q5T6F2 1119 aaKnown RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 PLAG1Q6DJT9 500 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 PAPD4Q6PIY7 484 aaKnown RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 TMIGD1Q6UXZ0 262 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 LINC00696Q6ZRV3 163 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 RAPH1Q70E73 1250 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 LRRC70Q7Z2Q7 622 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 CCDC91Q7Z6B0 441 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 TBC1D1Q86TI0 1168 aaPredicted RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 CENPLQ8N0S6 344 aaPredicted RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 KRT78Q8N1N4 520 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 FAM26EQ8N5C1 309 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 CISD2Q8N5K1 135 aaKnown RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 SNX31Q8N9S9 440 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 PLPP5Q8NEB5 264 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 UBTD2Q8WUN7 234 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 EXT2Q93063 718 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 TSLPQ969D9 159 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 TBC1D20Q96BZ9 403 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 C19orf60Q96EN9 201 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 WDR34Q96EX3 536 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 PEX11GQ96HA9 241 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 SMIM10Q96HG1 83 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 CNDP1Q96KN2 507 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 ATOH8Q96SQ7 321 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 FMO2Q99518 471 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 BARD1Q99728 777 aaKnown RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 EFCAB11Q9BUY7 163 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 CAPS2Q9BXY5 557 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 TSPYL1Q9H0U9 437 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 NT5DC2Q9H857 520 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 NMRAL1Q9HBL8 299 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 ASF1BQ9NVP2 202 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 NINJ2Q9NZG7 142 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 PTGFRNQ9P2B2 879 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 MTRF1LQ9UGC7 380 aaKnown RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 NTNG1Q9Y2I2 539 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 COPG1Q9Y678 874 aaKnown RBP6.6□□□□□ -1.35
YBX3-206ENST00000536823 ITPR2Q14571 2701 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 CRYBG3Q68DQ2 2970 aa6.6□□□□□ -1.35
YBX3-206ENST00000536823 TEX15Q9BXT5 2789 aa6.59□□□□□ -1.35
YBX3-206ENST00000536823 A0A087X1B8 175 aa6.59□□□□□ -1.35
YBX3-206ENST00000536823 IGKV3D-11A0A0A0MRZ8 115 aa6.59□□□□□ -1.35
YBX3-206ENST00000536823 TRAV17A0A0B4J275 112 aa6.59□□□□□ -1.35
YBX3-206ENST00000536823 IGHV3-20A0A0C4DH32 117 aa6.59□□□□□ -1.35
YBX3-206ENST00000536823 CCDC189A1A4V9 331 aa6.59□□□□□ -1.35
YBX3-206ENST00000536823 OR2W5A6NFC9 320 aa6.59□□□□□ -1.35
YBX3-206ENST00000536823 TCP11X1B4DZS4 312 aa6.59□□□□□ -1.35
YBX3-206ENST00000536823 SUPT3HB4E1H0 165 aa6.59□□□□□ -1.35
YBX3-206ENST00000536823 UBXN8O00124 270 aa6.59□□□□□ -1.35
YBX3-206ENST00000536823 PSMD12O00232 456 aaPredicted RBP6.59□□□□□ -1.35
YBX3-206ENST00000536823 ERI3O43414 337 aaKnown RBP6.59□□□□□ -1.35
YBX3-206ENST00000536823 CCNT2O60583 730 aaKnown RBP6.59□□□□□ -1.35
YBX3-206ENST00000536823 PRAMEF4O60810 478 aa6.59□□□□□ -1.35
YBX3-206ENST00000536823 DNAJB6O75190 326 aa6.59□□□□□ -1.35
YBX3-206ENST00000536823 H2AFYO75367 372 aaKnown RBP6.59□□□□□ -1.35
YBX3-206ENST00000536823 SUPT3HO75486 399 aa6.59□□□□□ -1.35
YBX3-206ENST00000536823 CDC123O75794 336 aaPredicted RBP6.59□□□□□ -1.35
YBX3-206ENST00000536823 TUBB4AP04350 444 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms