RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 GMPRP36959 345 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 MAGEA5P43359 124 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 STT3AP46977 705 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 GPX6P59796 221 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TFF3Q07654 80 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PCDH1Q08174 1060 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TESK1Q15569 626 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 MPEG1Q2M385 716 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 KHDRBS2Q5VWX1 349 aaKnown RBP18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 OR4C11Q6IEV9 310 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TBC1D1Q86TI0 1168 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TMEM251Q8N6I4 163 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 OR7G3Q8NG95 312 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 OR5M9Q8NGP3 310 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 DGAT2Q96PD7 388 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 NPDC1Q9NQX5 325 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 MS4A12Q9NXJ0 267 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 GRHL1Q9NZI5 618 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ADGRE2Q9UHX3 823 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ITPR3Q14573 2671 aa18.2■□□□□ 0.5
TNFRSF1B-204ENST00000536782 A0A1B0GVC2 190 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 FIGNL2A6NMB9 653 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 K7EPI3 171 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 RAD51CO43502 376 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 DYRK3O43781 588 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 FGF17O60258 216 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 KERAO60938 352 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SLC35E2BP0CK96 405 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 CCL3P10147 92 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ACVR2AP27037 513 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 MSX1P28360 303 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 DNASE1L1P49184 302 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 RIPPLY3P57055 190 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 IGLV3-21P80748 117 aaPredicted RBP18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ASPHQ12797 758 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 DLG1Q12959 904 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SLAMF1Q13291 335 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 BIKQ13323 160 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SLMAPQ14BN4 828 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 HYAL4Q2M3T9 481 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 KBTBD12Q3ZCT8 623 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PIGGQ5H8A4 983 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 DEPDC1Q5TB30 811 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ZNF585AQ6P3V2 769 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TRILQ7L0X0 811 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 CMC1Q7Z7K0 106 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 OR4N5Q8IXE1 308 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PPM1NQ8N819 430 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 NUBPLQ8TB37 319 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 UBTD2Q8WUN7 234 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 RBM18Q96H35 190 aaKnown RBP18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SENP5Q96HI0 755 aaPredicted RBP18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ATOH8Q96SQ7 321 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 CENPKQ9BS16 269 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 OR51B5Q9H339 312 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 RPF2Q9H7B2 306 aaKnown RBP18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 LIPGQ9Y5X9 500 aa18.19■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ATP6AP2A0A1C7CYW4 349 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 UBXN8O00124 270 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ATP6AP2O75787 350 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 FAM155BO75949 473 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 LTA4HP09960 611 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 EPB42P16452 691 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 CRABP2P29373 138 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 RAP1GDS1P52306 607 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 FOXO1Q12778 655 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 DDX39BQ13838 428 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SLC10A1Q14973 349 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 GRHL2Q6ISB3 625 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SPATA4Q8NEY3 305 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 OR10Q1Q8NGQ4 319 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SLC22A8Q8TCC7 542 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TANKQ92844 425 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 RGMAQ96B86 450 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ART5Q96L15 291 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SORBS1Q9BX66 1292 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 LDAHQ9H6V9 325 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 IGSF5Q9NSI5 407 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TUBA8Q9NY65 449 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PHF11Q9UIL8 331 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 ATG4BQ9Y4P1 393 aa18.18■□□□□ 0.5
TNFRSF1B-204ENST00000536782 AQP7O14520 342 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SUSD5O60279 629 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 IGKV3-11P04433 115 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TLX1P31314 330 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 STX2P32856 288 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PIK3CBP42338 1070 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 MAN2A2P49641 1150 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PLIN5Q00G26 463 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 FOLH1Q04609 750 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SLC22A10Q63ZE4 541 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 B3GNT6Q6ZMB0 384 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 GPR180Q86V85 440 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 C9orf40Q8IXQ3 194 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 DMRTC2Q8IXT2 367 aaPredicted RBP18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TEX9Q8N6V9 391 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 HUS1BQ8NHY5 278 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 PPWD1Q96BP3 646 aaKnown RBP18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 TTYH2Q9BSA4 534 aa18.17■□□□□ 0.5
TNFRSF1B-204ENST00000536782 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms