RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	EPC2	Q52LR7	807 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	DDI2	Q5TDH0	399 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	METTL4	Q8N3J2	472 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	ZNF614	Q8N883	585 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	CNNM3	Q8NE01	707 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	OR10G7	Q8NGN6	311 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	SAMD8	Q96LT4	415 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	TAAR6	Q96RI8	345 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	RAB40C	Q96S21	281 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	RAB17	Q9H0T7	212 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	UPF3A	Q9H1J1	476 aa	Known RBP	4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	CXXC4	Q9H2H0	198 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	HPS4	Q9NQG7	708 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	TXLNG	Q9NUQ3	528 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	CLCA3P	Q9Y6N3	262 aa		4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	MYH14	Q7Z406	1995 aa	Known RBP	4.58	□□□□□ -1.68
PRKDC-208	ENST00000536710	KIF7	Q2M1P5	1343 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	IGLV7-46	A0A075B6I9	117 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	TMEM89	A2RUT3	159 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	SOCS5	O75159	536 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	ADORA3	P0DMS8	318 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	FCAR	P24071	287 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	PRDX6	P30041	224 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	PKLR	P30613	574 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	NDST2	P52849	883 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	CRIP2	P52943	208 aa	Predicted RBP	4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	POLR2F	P61218	127 aa	Known RBP	4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	P2RY14	Q15391	338 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	ECSCR	Q19T08	205 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	C1orf189	Q5VU69	101 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	LIPJ	Q5W064	366 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	NEPRO	Q6NW34	567 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	CATSPER4	Q7RTX7	472 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	TBC1D10C	Q8IV04	446 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	OR4N5	Q8IXE1	308 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	LRRC17	Q8N6Y2	441 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	RELL2	Q8NC24	303 aa	Predicted RBP	4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	ICA1L	Q8NDH6	482 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	TAF4B	Q92750	862 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	HIST1H2AC	Q93077	130 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	C16orf58	Q96GQ5	468 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	COG3	Q96JB2	828 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	KCNK16	Q96T55	309 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	ASCL2	Q99929	193 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	JPH2	Q9BR39	696 aa	Predicted RBP	4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	FTHL17	Q9BXU8	183 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	HPF1	Q9NWY4	346 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	BARHL2	Q9NY43	387 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	ENTPD4	Q9Y227	616 aa		4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	MRPS18C	Q9Y3D5	142 aa	Known RBP	4.57	□□□□□ -1.68
PRKDC-208	ENST00000536710	CNTNAP2	Q9UHC6	1331 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	PRR23D1	E9PI22	279 aa	Predicted RBP	4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	NEDD8-MDP1	E9PL57	170 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710		G3V2L1	256 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	TFEC	O14948	347 aa	Predicted RBP	4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	PTBP3	O95758	552 aa	Known RBP	4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	ZSCAN5DP	P0CG00	497 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	PRR23D2	P0DMB1	279 aa	Predicted RBP	4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	EDNRA	P25101	427 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	FCGR2B	P31994	310 aa	Predicted RBP	4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	FCGR2C	P31995	323 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	CHRNA3	P32297	505 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	ASMT	P46597	345 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	NME3	Q13232	169 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	NECTIN1	Q15223	517 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	MLF2	Q15773	248 aa	Predicted RBP	4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	MOGAT2	Q3SYC2	334 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	LDLRAP1	Q5SW96	308 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	RAET1G	Q6H3X3	334 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	IRGC	Q6NXR0	463 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	ZCCHC12	Q6PEW1	402 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	CDHR3	Q6ZTQ4	885 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	TMEM26	Q6ZUK4	368 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	ADCK1	Q86TW2	530 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	ERC1	Q8IUD2	1116 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	AQP11	Q8NBQ7	271 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	OR6F1	Q8NGZ6	308 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	GOLGA5	Q8TBA6	731 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	PHYHIP	Q92561	330 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	NSMCE3	Q96MG7	304 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	ATG10	Q9H0Y0	220 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	RWDD1	Q9H446	243 aa	Predicted RBP	4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	TMEM231	Q9H6L2	316 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	NMUR1	Q9HB89	426 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	SLC25A19	Q9HC21	320 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	NGB	Q9NPG2	151 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	IL1RAP	Q9NPH3	570 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	SOHLH2	Q9NX45	425 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	ERRFI1	Q9UJM3	462 aa	Predicted RBP	4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	RNF215	Q9Y6U7	377 aa		4.56	□□□□□ -1.68
PRKDC-208	ENST00000536710	LOC105371242	A0A075B767	164 aa		4.55	□□□□□ -1.68
PRKDC-208	ENST00000536710	ZNF749	O43361	778 aa		4.55	□□□□□ -1.68
PRKDC-208	ENST00000536710	CSDE1	O75534	798 aa	Known RBP	4.55	□□□□□ -1.68
PRKDC-208	ENST00000536710	ZFAND5	O76080	213 aa		4.55	□□□□□ -1.68
PRKDC-208	ENST00000536710	APRT	P07741	180 aa		4.55	□□□□□ -1.68
PRKDC-208	ENST00000536710	PPP2R1A	P30153	589 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms