RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ZFP64Q9NPA5 681 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 RASSF1Q9NS23 344 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CD274Q9NZQ7 290 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SPRR3Q9UBC9 169 aa11.97□□□□□ -0.49
TNFRSF1A-207ENST00000535958 IQANK1A0A1B0GTG1 560 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 A6NNC1 897 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CCNT2O60583 730 aaKnown RBP11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 GDF1P27539 372 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SERPINB3P29508 390 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 RPL21P46778 160 aaKnown RBP11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 STT3AP46977 705 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TRPC1P48995 793 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 RAP1GDS1P52306 607 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 IRF8Q02556 426 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 FOXO1Q12778 655 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 FOXD4Q12950 439 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 BIKQ13323 160 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 KEAP1Q14145 624 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DOC2AQ14183 400 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TMEM35AQ53FP2 167 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 FBXO48Q5FWF7 155 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PIGGQ5H8A4 983 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 STEAP4Q687X5 459 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SULT1C3Q6IMI6 304 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CHSY3Q70JA7 882 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CAMKMTQ7Z624 323 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ULK2Q8IYT8 1036 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 SLC15A4Q8N697 577 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ACOT4Q8N9L9 421 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 FAM222BQ8WU58 562 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ANKRD49Q8WVL7 239 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 EXT2Q93063 718 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 HSPBAP1Q96EW2 488 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ZNF597Q96LX8 424 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 MAPKAP1Q9BPZ7 522 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 TMEM79Q9BSE2 394 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DOHHQ9BU89 302 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DERL2Q9GZP9 239 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 RHOJQ9H4E5 214 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 DMRT3Q9NQL9 472 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ZNF358Q9NW07 568 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 MS4A12Q9NXJ0 267 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 QPCTLQ9NXS2 382 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 CNIH4Q9P003 139 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 FOXD3Q9UJU5 478 aaPredicted RBP11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PCDHGB3Q9Y5G1 929 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 PSAT1Q9Y617 370 aa11.96□□□□□ -0.49
TNFRSF1A-207ENST00000535958 ABCA4P78363 2273 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ANKHD1Q8IWZ3 2542 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RTCAO00442 366 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 OR10H2O60403 315 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SH3BGRLO75368 114 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ETHE1O95571 254 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 IL2RAP01589 272 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 HIST1H1TP22492 207 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TACR1P25103 407 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ATP5A1P25705 553 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SERPINB1P30740 379 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TLX1P31314 330 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 BUD31P41223 144 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ATP6V0D1P61421 351 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CHIT1Q13231 466 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 FRG1Q14331 258 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TMEM198Q66K66 360 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ADNP2Q6IQ32 1131 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RNF111Q6ZNA4 994 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SYDE1Q6ZW31 735 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 MAATS1Q7Z4T9 603 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 VN1R5Q7Z5H4 357 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CDC20BQ86Y33 519 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 C9orf40Q8IXQ3 194 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TAGAPQ8N103 731 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 MMP21Q8N119 569 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 FBXO36Q8NEA4 188 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 NEIL3Q8TAT5 605 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PAQR8Q8TEZ7 354 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 ZNF721Q8TF20 911 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CDKL2Q92772 493 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RNASE6Q93091 150 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SENP5Q96HI0 755 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CAPZA3Q96KX2 299 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PELOQ9BRX2 385 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 MS4A8Q9BY19 250 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SLC6A15Q9H2J7 730 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 LIME1Q9H400 295 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SEMA4BQ9NPR2 832 aaPredicted RBP11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PRDM7Q9NQW5 492 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RYDENQ9NUL5 291 aaKnown RBP11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PHF11Q9UIL8 331 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 RNF112Q9ULX5 631 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TEX264Q9Y6I9 313 aa11.95□□□□□ -0.5
TNFRSF1A-207ENST00000535958 EML6Q6ZMW3 1958 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TUBAL3A6NHL2 446 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CAPN14A8MX76 684 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SAP18O00422 153 aaKnown RBP11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 SYT5O00445 386 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 CES2O00748 559 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 TP53I11O14683 189 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 PROM1O43490 865 aa11.94□□□□□ -0.5
TNFRSF1A-207ENST00000535958 FGF17O60258 216 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms