RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 OXTRP30559 389 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 EPHA5P54756 1037 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 NRLP54845 237 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 MAZP56270 477 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 PSPHP78330 225 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SETMARQ53H47 684 aaPredicted RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 FAM76BQ5HYJ3 339 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ZNF730Q6ZMV8 503 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ZNF438Q7Z4V0 828 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SYT14Q8NB59 555 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 OR1J4Q8NGS1 313 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 BTN2A2Q8WVV5 523 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 PSMG2Q969U7 264 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 PHYHIPLQ96FC7 376 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 PRRC1Q96M27 445 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 YIPF4Q9BSR8 244 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 AMBNQ9NP70 447 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 FGF20Q9NP95 211 aaPredicted RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 BABAM2Q9NXR7 383 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 EIF3KQ9UBQ5 218 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 CACNG2Q9Y698 323 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 BORCS7-ASMTA0A0B4J1R7 106 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 DISC1C4P0D8 188 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 H0Y858 1186 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 FOXE1O00358 373 aaPredicted RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 CTDSP2O14595 271 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 CDC40O60508 579 aaKnown RBP eCLIP3.88□□□□□ -1.79
SOX6-217ENST00000533870 DUSP11O75319 330 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 CR2P20023 1033 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 FPR3P25089 353 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SHMT2P34897 504 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 LIPAP38571 399 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 CLCNKAP51800 687 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 NR0B1P51843 470 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 MANFP55145 182 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 TSPAN5P62079 268 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 NKX3-2P78367 333 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 HMGCS1Q01581 520 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 TSPAN31Q12999 210 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 HNRNPA0Q13151 305 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 LASP1Q14847 261 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 MFSD13AQ14CX5 517 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 AFMIDQ63HM1 303 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 CEP68Q76N32 757 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 RTL10Q7L3V2 364 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 TAF8Q7Z7C8 310 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 RNF180Q86T96 592 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 OSTM1Q86WC4 334 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 FAM20CQ8IXL6 584 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 IL17RDQ8NFM7 739 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 OR6F1Q8NGZ6 308 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ANKRD49Q8WVL7 239 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ARL11Q969Q4 196 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ZC3H10Q96K80 434 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 UQCC2Q9BRT2 126 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 OCEL1Q9H607 264 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 MKKSQ9NPJ1 570 aaPredicted RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 UBR1Q8IWV7 1749 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TEX13CA0A0J9YWL9 993 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 MYBPHLA2RUH7 354 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 GPR89AB7ZAQ6 455 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 SEC14L5O43304 696 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 FMO6PO60774 539 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 VTNP04004 478 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 IL5P05113 134 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 ERCC1P07992 297 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 GPR89BP0CG08 455 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 C1GALT1C1LP0DN25 315 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 HOXB1P14653 301 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 IFNGR1P15260 489 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 NDUFV2P19404 249 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TCEA1P23193 301 aaKnown RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 TPMTP51580 245 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 KCNQ1P51787 676 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 NUDT6P53370 316 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TAF10Q12962 218 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 NAE1Q13564 534 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 MEF2DQ14814 521 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 SMAD1Q15797 465 aaKnown RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 OTUD1Q5VV17 481 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 GLT8D1Q68CQ7 371 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 RPL22L1Q6P5R6 122 aaKnown RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 YIPF7Q8N8F6 280 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 OR13C4Q8NGS5 318 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 ELP5Q8TE02 316 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 SNX33Q8WV41 574 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TCTEX1D2Q8WW35 142 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 DMRTB1Q96MA1 342 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 SIGLEC11Q96RL6 698 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 NTN4Q9HB63 628 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 TIGARQ9NQ88 270 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 PRDM9Q9NQV7 894 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 ACOXLQ9NUZ1 547 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 IL37Q9NZH6 218 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 SLC2A6Q9UGQ3 507 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 ERVK-19Q9WJR5 959 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 CCL15-CCL14A0A0B4J2E2 113 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 MANSC4A6NHS7 340 aaPredicted RBP3.87□□□□□ -1.79
SOX6-217ENST00000533870 LOC730098B7Z3J9 87 aa3.87□□□□□ -1.79
SOX6-217ENST00000533870 I6L893 689 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms