RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TSPAN8P19075 237 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 CNTFP26441 200 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 BUD31P41223 144 aaPredicted RBP9.7□□□□□ -0.86
CAPN1-225ENST00000533704 SOX3P41225 446 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 MAGEA12P43365 314 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 HK2P52789 917 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 FOLH1Q04609 750 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.7□□□□□ -0.86
CAPN1-225ENST00000533704 MDGA2Q7Z553 956 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 SIAH3Q8IW03 269 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 SULF2Q8IWU5 870 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 IFT20Q8IY31 132 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 GHDCQ8N2G8 530 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 L3MBTL4Q8NA19 623 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 CCDC120Q96HB5 630 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 CNPPD1Q9BV87 410 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 MRPL46Q9H2W6 279 aaKnown RBP9.7□□□□□ -0.86
CAPN1-225ENST00000533704 TRIM45Q9H8W5 580 aaPredicted RBP9.7□□□□□ -0.86
CAPN1-225ENST00000533704 PCTPQ9UKL6 214 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 TMCO1Q9UM00 188 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 PPIEQ9UNP9 301 aaKnown RBP9.7□□□□□ -0.86
CAPN1-225ENST00000533704 ATG4BQ9Y4P1 393 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 ITPR2Q14571 2701 aa9.7□□□□□ -0.86
CAPN1-225ENST00000533704 TMEM200CA6NKL6 621 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 WASHC1A8K0Z3 465 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 STX16-NPEPL1H3BU86 382 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 NCKAP5O14513 1909 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 CDK2AP1O14519 115 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 STX16O14662 325 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 TMPRSS11DO60235 418 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 HS6ST1O60243 411 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 OR10H2O60403 315 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 FAM58BPP0C7Q3 252 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 COL6A2P12110 1019 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 PTGER1P34995 402 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 STT3AP46977 705 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 RNF4P78317 190 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 PLIN5Q00G26 463 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 PLGLB1Q02325 96 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 IFT88Q13099 833 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 ZNF750Q32MQ0 723 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 LGSNQ5TDP6 509 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 MTFR2Q6P444 385 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 C3P1Q6ZMU1 363 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 DGAT2L6Q6ZPD8 337 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 MILR1Q7Z6M3 343 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 MRGPRGQ86SM5 289 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 NUDT13Q86X67 352 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 SPPL2CQ8IUH8 684 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 GSPT2Q8IYD1 628 aaKnown RBP9.69□□□□□ -0.86
CAPN1-225ENST00000533704 ARMC10Q8N2F6 343 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 ZCCHC7Q8N3Z6 543 aaKnown RBP9.69□□□□□ -0.86
CAPN1-225ENST00000533704 POGLUT1Q8NBL1 392 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 CREBBPQ92793 2442 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 TANKQ92844 425 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 ISL2Q96A47 359 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 RBM18Q96H35 190 aaKnown RBP9.69□□□□□ -0.86
CAPN1-225ENST00000533704 RASL10BQ96S79 203 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 SERPINI1Q99574 410 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 MRPL57Q9BQC6 102 aaKnown RBP9.69□□□□□ -0.86
CAPN1-225ENST00000533704 TEX15Q9BXT5 2789 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 ELOVL6Q9H5J4 265 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 WDR41Q9HAD4 459 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 LYARQ9NX58 379 aaKnown RBP9.69□□□□□ -0.86
CAPN1-225ENST00000533704 MS4A12Q9NXJ0 267 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 MYOTQ9UBF9 498 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 ZNF180Q9UJW8 692 aa9.69□□□□□ -0.86
CAPN1-225ENST00000533704 EXPH5Q8NEV8 1989 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 A0A0A6YYD5 115 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 A0A0G2JMM0 328 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 A0A1W2PPB8 328 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 A0A1W2PR48 441 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 A0A1W2PRS3 328 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 A8MT66 165 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 FAM166BA8MTA8 275 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 KIR3DP1A8MWS1 328 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 GOLGA8RI6L899 631 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 HRKO00198 91 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 PDE9AO76083 593 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 AIFM1O95831 613 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 FAM153BP0C7A2 387 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 ALOX15P16050 662 aaPredicted RBP9.68□□□□□ -0.86
CAPN1-225ENST00000533704 BSGP35613 385 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 CDH13P55290 713 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 HERVK_113P63132 956 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 ERVK-8P63133 956 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 IGLV3-21P80748 117 aaPredicted RBP9.68□□□□□ -0.86
CAPN1-225ENST00000533704 ASPHQ12797 758 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 TRAF3Q13114 568 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 CUL3Q13618 768 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 ZNF267Q14586 743 aaPredicted RBP9.68□□□□□ -0.86
CAPN1-225ENST00000533704 FAM153CQ494X1 144 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 FAM219BQ5XKK7 198 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 FRG2Q64ET8 278 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 METTL2BQ6P1Q9 378 aaKnown RBP9.68□□□□□ -0.86
CAPN1-225ENST00000533704 NCCRP1Q6ZVX7 275 aaPredicted RBP9.68□□□□□ -0.86
CAPN1-225ENST00000533704 TRMT10CQ7L0Y3 403 aaKnown RBP9.68□□□□□ -0.86
CAPN1-225ENST00000533704 PSD4Q8NDX1 1056 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 OR4F6Q8NGB9 312 aa9.68□□□□□ -0.86
CAPN1-225ENST00000533704 OR5L2Q8NGL0 311 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms