RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 P04436 131 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 SLC35E2BP0CK96 405 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 PIGAP37287 484 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 STT3AP46977 705 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 IGLV3-21P80748 117 aaPredicted RBP15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 DDX39BQ13838 428 aaKnown RBP15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 SLMAPQ14BN4 828 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 AP5B1Q2VPB7 878 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 TMEM35AQ53FP2 167 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 RTL6Q6ICC9 239 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 MED27Q6P2C8 311 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 ADGRD1Q6QNK2 874 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 SPNS3Q6ZMD2 512 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 C3orf62Q6ZUJ4 267 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 ACAD11Q709F0 780 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 ISCA2Q86U28 154 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 CTAGE3PQ8IX95 158 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 BBOF1Q8ND07 529 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 OR7G3Q8NG95 312 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 OR5L2Q8NGL0 311 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 PPWD1Q96BP3 646 aaKnown RBP15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 SGCZQ96LD1 299 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 DGAT2Q96PD7 388 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 ATOH8Q96SQ7 321 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 TTYH2Q9BSA4 534 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 GRPEL1Q9HAV7 217 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 GRHL1Q9NZI5 618 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 NUDT4Q9NZJ9 180 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 WHRNQ9P202 907 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 SPACA6W5XKT8 324 aa15.78■□□□□ 0.12
RPUSD4-207ENST00000532800 FIGNL2A6NMB9 653 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 FOXO6A8MYZ6 492 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 AQP7O14520 342 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 BCKDKO14874 412 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 EIF3HO15372 352 aaKnown RBP eCLIP15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 RAD51CO43502 376 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 NADKO95544 446 aaPredicted RBP15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 IGKV3-11P04433 115 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 GLI4P10075 376 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 ENDOUP21128 410 aaKnown RBP15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 CALCOCO2Q13137 446 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 SLAMF1Q13291 335 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 MPEG1Q2M385 716 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 HYAL4Q2M3T9 481 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 KBTBD12Q3ZCT8 623 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 PIGGQ5H8A4 983 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 KHDRBS2Q5VWX1 349 aaKnown RBP15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 C18orf63Q68DL7 685 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 LYPD8Q6UX82 237 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 RAPH1Q70E73 1250 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 PPM1NQ8N819 430 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 OR10Q1Q8NGQ4 319 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 STAG3L4Q8TBR4 150 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 UBTD2Q8WUN7 234 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 SENP5Q96HI0 755 aaPredicted RBP15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 ERP44Q9BS26 406 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 CNPPD1Q9BV87 410 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 IGSF5Q9NSI5 407 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 OPTCQ9UBM4 332 aa15.77■□□□□ 0.12
RPUSD4-207ENST00000532800 ZFHX3Q15911 3703 aa15.77■□□□□ 0.11
RPUSD4-207ENST00000532800 A0A0G2JNJ9 132 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 FAM187AA6NFU0 413 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 K7EPI3 171 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 KERAO60938 352 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 HOXD4P09016 255 aaPredicted RBP15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 COX7A2P14406 83 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 SPRP35270 261 aaPredicted RBP15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 ADH7P40394 386 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 MAN2A2P49641 1150 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 HNRNPH2P55795 449 aaKnown RBP15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 FOLH1Q04609 750 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 ZNF791Q3KP31 576 aaPredicted RBP15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 DEPDC1Q5TB30 811 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 GRTP1Q5TC63 336 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 PRAMEF20Q5VT98 475 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 OR4C11Q6IEV9 310 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 GRHL2Q6ISB3 625 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 B3GNT6Q6ZMB0 384 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 CHSY3Q70JA7 882 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 TMEM200AQ86VY9 491 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 LIX1LQ8IVB5 337 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 HUS1BQ8NHY5 278 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 NUBPLQ8TB37 319 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 UBE2E3Q969T4 207 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 CMTM7Q96FZ5 175 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 ZNF559Q9BR84 538 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 LDAHQ9H6V9 325 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 RPF2Q9H7B2 306 aaKnown RBP15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 SH2D2AQ9NP31 389 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 DMRT3Q9NQL9 472 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 SPRR3Q9UBC9 169 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 Q9UFV3 132 aa15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 SETD2Q9BYW2 2564 aaPredicted RBP15.76■□□□□ 0.11
RPUSD4-207ENST00000532800 ARHGAP21Q5T5U3 1957 aa15.75■□□□□ 0.11
RPUSD4-207ENST00000532800 PLPP1O14494 284 aa15.75■□□□□ 0.11
RPUSD4-207ENST00000532800 KLK8O60259 260 aa15.75■□□□□ 0.11
RPUSD4-207ENST00000532800 LRATO95237 230 aa15.75■□□□□ 0.11
RPUSD4-207ENST00000532800 RFPL3SP0C7P2 107 aa15.75■□□□□ 0.11
RPUSD4-207ENST00000532800 MTHFD2P13995 350 aa15.75■□□□□ 0.11
RPUSD4-207ENST00000532800 RAP1GDS1P52306 607 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms