RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 OR2A25A4D2G3 310 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 HEPACAM2A8MVW5 462 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 GABRDO14764 452 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 OIP5O43482 229 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 MFSD11O43934 449 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 LCMT2O60294 686 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 EEDO75530 441 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 MATN4O95460 622 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 TACR2P21452 398 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 GPX3P22352 226 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 HTR2AP28223 471 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ACVRL1P37023 503 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 CXCR3P49682 368 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 RGS4P49798 205 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ZNF252P-AS1Q0IIN9 211 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 OPCMLQ14982 345 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 OCLNQ16625 522 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 AAK1Q2M2I8 961 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 FAM174BQ3ZCQ3 159 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 KLHL22Q53GT1 634 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 GLRX5Q86SX6 157 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ZSCAN1Q8NBB4 408 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 OR52J3Q8NH60 311 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 PIGKQ92643 395 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 TADA1Q96BN2 335 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 RPP25Q9BUL9 199 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 TRMT61BQ9BVS5 477 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 CACNG6Q9BXT2 260 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ZYG11BQ9C0D3 744 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 DUSP21Q9H596 190 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 NUDT15Q9NV35 164 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 MS4A12Q9NXJ0 267 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 TBC1D24Q9ULP9 559 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 CLEC4AQ9UMR7 237 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 CA5BQ9Y2D0 317 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 RPL36Q9Y3U8 105 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 SPTA1P02549 2419 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 A0A0D9SEW6 157 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 E9PI62 339 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 LEFTY2O00292 366 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC16A6O15403 523 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 GATCO43716 136 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 SSX4O60224 188 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 HTR3BO95264 441 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 PRAMEF12O95522 483 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 RLN1P04808 185 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ZDHHC11BP0C7U3 371 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 SLC35E2BP0CK96 405 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 GGT1P19440 569 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 PTX3P26022 381 aaPredicted RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 FEN1P39748 380 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 RAB13P51153 203 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 AIF1P55008 147 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 PSMA6P60900 246 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 CREMQ03060 361 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 OLIG2Q13516 323 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 GRM7Q14831 915 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 SPHARQ15513 63 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 AVPI1Q5T686 147 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 IDNKQ5T6J7 187 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 NUDT18Q6ZVK8 323 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 SCD5Q86SK9 330 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 FAM217AQ8IXS0 508 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 RGL4Q8IZJ4 473 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 OR10G2Q8NGC3 310 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 NECAB3Q96P71 396 aaPredicted RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 OR2A14Q96R47 310 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 CRB3Q9BUF7 120 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 QRSL1Q9H0R6 528 aaKnown RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 ZBP1Q9H171 429 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 BPIFA1Q9NP55 256 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 C14orf105Q9NVL8 296 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 MAP10Q9P2G4 905 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 EXTL2Q9UBQ6 330 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 STUB1Q9UNE7 303 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 POFUT2Q9Y2G5 429 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 NAALAD2Q9Y3Q0 740 aa6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 GREB1LQ9C091 1923 aaPredicted RBP6.51□□□□□ -1.37
TGFBR3-209ENST00000532540 GSAPA4D1B5 854 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 LRRC14BA6NHZ5 514 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 H3BNC9 293 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 H7C0S8 307 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 REM1O75628 298 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 SIX3O95343 332 aaPredicted RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 RB1P06400 928 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 ADRB1P08588 477 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 H2AFB2P0C5Z0 115 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 HOXB1P14653 301 aaPredicted RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 POU2F1P14859 743 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 ARSAP15289 507 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 HCAR3P49019 387 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 TGM4P49221 684 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 STK19P49842 368 aaPredicted RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 AP3S2P59780 193 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 CLDN10P78369 228 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 MARC1Q5VT66 337 aa6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 PTCRAQ6ISU1 281 aaPredicted RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 ESRP1Q6NXG1 681 aaKnown RBP6.5□□□□□ -1.37
TGFBR3-209ENST00000532540 CXXC5Q7LFL8 322 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms