RNA–Protein interactions for RNA: ENST00000532500.1

CPNE7-206, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-206ENST00000532500 TRIM45Q9H8W5 580 aaPredicted RBP10.58□□□□□ -0.72
CPNE7-206ENST00000532500 LYRM4Q9HD34 91 aa10.58□□□□□ -0.72
CPNE7-206ENST00000532500 DMRT3Q9NQL9 472 aa10.58□□□□□ -0.72
CPNE7-206ENST00000532500 NINJ2Q9NZG7 142 aa10.58□□□□□ -0.72
CPNE7-206ENST00000532500 MYOTQ9UBF9 498 aa10.58□□□□□ -0.72
CPNE7-206ENST00000532500 VTI1BQ9UEU0 232 aa10.58□□□□□ -0.72
CPNE7-206ENST00000532500 ITGB1BP2Q9UKP3 347 aa10.58□□□□□ -0.72
CPNE7-206ENST00000532500 RNF11Q9Y3C5 154 aa10.58□□□□□ -0.72
CPNE7-206ENST00000532500 HRH3Q9Y5N1 445 aa10.58□□□□□ -0.72
CPNE7-206ENST00000532500 A0A087X1B8 175 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 A0A096LPK6 155 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 HMX2A2RU54 273 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 NKX2-6A6NCS4 301 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 NPIPA2E9PIF3 369 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 NPIPA3F8WFD2 350 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 EEDO75530 441 aaKnown RBP10.57□□□□□ -0.72
CPNE7-206ENST00000532500 ACSL3O95573 720 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 CELA3AP09093 270 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 CCL3P10147 92 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 MTHFD2P13995 350 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 TYK2P29597 1187 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 ILF2Q12905 390 aaKnown RBP10.57□□□□□ -0.72
CPNE7-206ENST00000532500 NAB1Q13506 487 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 GTF2H2Q13888 395 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 SETDB1Q15047 1291 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 FAM83EQ2M2I3 478 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 TMEM35AQ53FP2 167 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 SGO1Q5FBB7 561 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 PRAMEF20Q5VT98 475 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 GTF2H2CQ6P1K8 395 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 FAM47EQ6ZV65 393 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 CYS1Q717R9 158 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 GDF7Q7Z4P5 450 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 CCDC71Q8IV32 467 aaPredicted RBP10.57□□□□□ -0.72
CPNE7-206ENST00000532500 PLD6Q8N2A8 252 aaKnown RBP10.57□□□□□ -0.72
CPNE7-206ENST00000532500 ARMC10Q8N2F6 343 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 MARVELD2Q8N4S9 558 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 POGLUT1Q8NBL1 392 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 MORN4Q8NDC4 146 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 SRFBP1Q8NEF9 429 aaKnown RBP10.57□□□□□ -0.72
CPNE7-206ENST00000532500 OR5M3Q8NGP4 307 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 FAM57AQ8TBR7 257 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 CA5BP1Q8WTZ4 195 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 IFT81Q8WYA0 676 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 UBE2E3Q969T4 207 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 RGMAQ96B86 450 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 PHF21BQ96EK2 531 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 SEC16BQ96JE7 1060 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 ROGDIQ9GZN7 287 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 RUBCNLQ9H714 662 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 RPF2Q9H7B2 306 aaKnown RBP10.57□□□□□ -0.72
CPNE7-206ENST00000532500 CHST11Q9NPF2 352 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 ZDHHC18Q9NUE0 388 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 COPS7AQ9UBW8 275 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 PPIEQ9UNP9 301 aaKnown RBP10.57□□□□□ -0.72
CPNE7-206ENST00000532500 ATG4BQ9Y4P1 393 aa10.57□□□□□ -0.72
CPNE7-206ENST00000532500 MED13LQ71F56 2210 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 ATP6AP2A0A1C7CYW4 349 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 A0A1W2PS29 197 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 SYCE1LA8MT33 242 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 E9PLN8 166 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 TMPRSS11DO60235 418 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 OR10H2O60403 315 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 ATP6AP2O75787 350 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 ALDOAP04075 364 aaKnown RBP10.56□□□□□ -0.72
CPNE7-206ENST00000532500 COX7A2P14406 83 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 PIGAP37287 484 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 CASP2P42575 452 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 MAGEA5P43359 124 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 SERPINB8P50452 374 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 KRTAP10-9P60411 292 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 HERVK_113P63132 956 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 ERVK-8P63133 956 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 TNFRSF17Q02223 184 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 CKAP4Q07065 602 aaKnown RBP10.56□□□□□ -0.72
CPNE7-206ENST00000532500 SERTAD2Q14140 314 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 ZNF267Q14586 743 aaPredicted RBP10.56□□□□□ -0.72
CPNE7-206ENST00000532500 DEPDC1Q5TB30 811 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 CYP20A1Q6UW02 462 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 TMEM64Q6YI46 380 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 MEX3BQ6ZN04 569 aaKnown RBP10.56□□□□□ -0.72
CPNE7-206ENST00000532500 RTL4Q6ZR62 310 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 GPR180Q86V85 440 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 C9orf40Q8IXQ3 194 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 PTGR2Q8N8N7 351 aaPredicted RBP10.56□□□□□ -0.72
CPNE7-206ENST00000532500 ZFP62Q8NB50 900 aaPredicted RBP10.56□□□□□ -0.72
CPNE7-206ENST00000532500 FAM13CQ8NE31 585 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 ZNF721Q8TF20 911 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 ATP6V1E2Q96A05 226 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 JSRP1Q96MG2 331 aaPredicted RBP10.56□□□□□ -0.72
CPNE7-206ENST00000532500 NSUN5Q96P11 429 aaKnown RBP10.56□□□□□ -0.72
CPNE7-206ENST00000532500 DMRTA2Q96SC8 542 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 VKORC1Q9BQB6 163 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 ERVK-6Q9BXR3 956 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 TTTY12Q9BZ98 90 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 TRIM8Q9BZR9 551 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 UCK2Q9BZX2 261 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 EXO5Q9H790 373 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 IPPKQ9H8X2 491 aa10.56□□□□□ -0.72
CPNE7-206ENST00000532500 SEMA4BQ9NPR2 832 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms