RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 PIK3R1P27986 724 aa20.88■□□□□ 0.93
LRRK1-208ENST00000532029 RHDQ02161 417 aa20.88■□□□□ 0.93
LRRK1-208ENST00000532029 C2orf80Q0P641 193 aa20.88■□□□□ 0.93
LRRK1-208ENST00000532029 CHAF1BQ13112 559 aa20.88■□□□□ 0.93
LRRK1-208ENST00000532029 CPZQ66K79 652 aa20.88■□□□□ 0.93
LRRK1-208ENST00000532029 PAPD4Q6PIY7 484 aaKnown RBP20.88■□□□□ 0.93
LRRK1-208ENST00000532029 IKBIPQ70UQ0 350 aa20.88■□□□□ 0.93
LRRK1-208ENST00000532029 OR4K14Q8NGD5 310 aa20.88■□□□□ 0.93
LRRK1-208ENST00000532029 DNAJB14Q8TBM8 379 aa20.88■□□□□ 0.93
LRRK1-208ENST00000532029 UCN3Q969E3 161 aa20.88■□□□□ 0.93
LRRK1-208ENST00000532029 C1orf50Q9BV19 199 aa20.88■□□□□ 0.93
LRRK1-208ENST00000532029 AKTIPQ9H8T0 292 aa20.88■□□□□ 0.93
LRRK1-208ENST00000532029 EIF3LQ9Y262 564 aaKnown RBP20.88■□□□□ 0.93
LRRK1-208ENST00000532029 ZFHX4Q86UP3 3567 aa20.88■□□□□ 0.93
LRRK1-208ENST00000532029 MYOCOSA0A1B0GUC4 107 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 WASHC1A8K0Z3 465 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 A8MUA0 341 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 TCP11X1B4DZS4 312 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 BCKDHAP12694 445 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 SDC1P18827 310 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 TNNI3P19429 210 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 IGLV3-21P80748 117 aaPredicted RBP20.87■□□□□ 0.93
LRRK1-208ENST00000532029 AIMP2Q13155 320 aaKnown RBP20.87■□□□□ 0.93
LRRK1-208ENST00000532029 SMU1Q2TAY7 513 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 SLC48A1Q6P1K1 146 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 RIPOR1Q6ZS17 1223 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 APLFQ8IW19 511 aaPredicted RBP20.87■□□□□ 0.93
LRRK1-208ENST00000532029 MMP21Q8N119 569 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 EXTL1Q92935 676 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 DGAT2Q96PD7 388 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 TSSK3Q96PN8 268 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 PELOQ9BRX2 385 aaKnown RBP20.87■□□□□ 0.93
LRRK1-208ENST00000532029 ADAP2Q9NPF8 381 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 MIEF1Q9NQG6 463 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 HEY2Q9UBP5 337 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 CLDN16Q9Y5I7 305 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 USH1CQ9Y6N9 552 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 PTPRQQ9UMZ3 2332 aa20.87■□□□□ 0.93
LRRK1-208ENST00000532029 SDHDO14521 159 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 ERAL1O75616 437 aaKnown RBP20.86■□□□□ 0.93
LRRK1-208ENST00000532029 PRPS2P11908 318 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 ICAM2P13598 275 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 ALOX15P16050 662 aaPredicted RBP20.86■□□□□ 0.93
LRRK1-208ENST00000532029 LBPP18428 481 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 TACR1P25103 407 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 ASMTP46597 345 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 PLIN5Q00G26 463 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 GUCY1A3Q02108 690 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 EMX2Q04743 252 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 ELAVL1Q15717 326 aaKnown RBP20.86■□□□□ 0.93
LRRK1-208ENST00000532029 EXT1Q16394 746 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 VWA5B1Q5TIE3 1220 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 IL23RQ5VWK5 629 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 FAM71E1Q6IPT2 247 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 PARP9Q8IXQ6 854 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 LRRC34Q8IZ02 419 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 KLHL29Q96CT2 875 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 WDR77Q9BQA1 342 aaPredicted RBP20.86■□□□□ 0.93
LRRK1-208ENST00000532029 ARHGAP9Q9BRR9 750 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 C5AR2Q9P296 337 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 RALYQ9UKM9 306 aaKnown RBP20.86■□□□□ 0.93
LRRK1-208ENST00000532029 CES1P1Q9UKY3 287 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 ZZEF1O43149 2961 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 PCSK5Q92824 1860 aa20.86■□□□□ 0.93
LRRK1-208ENST00000532029 SCN2AQ99250 2005 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 SAGE2PA6NJ88 616 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 MASP2O00187 686 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 OR10H2O60403 315 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 PRR35P0CG20 571 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 COX7A2P14406 83 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 DDCP20711 480 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 ITGA3P26006 1051 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 MDH1P40925 334 aaKnown RBP20.85■□□□□ 0.93
LRRK1-208ENST00000532029 STT3AP46977 705 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 CCL11P51671 97 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 AP2B1P63010 937 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 ERVK-8P63133 956 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 BTBD16Q32M84 506 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 IRAK1BP1Q5VVH5 260 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 NXNQ6DKJ4 435 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 KBTBD2Q8IY47 623 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 LIX1Q8N485 282 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.85■□□□□ 0.93
LRRK1-208ENST00000532029 RBM18Q96H35 190 aaKnown RBP20.85■□□□□ 0.93
LRRK1-208ENST00000532029 IMMP1LQ96LU5 166 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 TRIM55Q9BYV6 548 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 GIMAP4Q9NUV9 329 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 NOP53Q9NZM5 478 aaKnown RBP20.85■□□□□ 0.93
LRRK1-208ENST00000532029 EHD3Q9NZN3 535 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 BAIAP2L1Q9UHR4 511 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 UTS2RQ9UKP6 389 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 G3BP2Q9UN86 482 aaKnown RBP20.85■□□□□ 0.93
LRRK1-208ENST00000532029 CLCA3PQ9Y6N3 262 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 ZNF780BQ9Y6R6 833 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 CELSR3Q9NYQ7 3312 aa20.85■□□□□ 0.93
LRRK1-208ENST00000532029 GOLGA8QA0A0J9YX86 632 aa20.84■□□□□ 0.93
LRRK1-208ENST00000532029 GOLGA8OA6NCC3 632 aa20.84■□□□□ 0.93
LRRK1-208ENST00000532029 GOLGA8NF8WBI6 632 aa20.84■□□□□ 0.93
LRRK1-208ENST00000532029 DYRK3O43781 588 aa20.84■□□□□ 0.93
LRRK1-208ENST00000532029 EDF1O60869 148 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms