RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 NDRG3Q9UGV2 375 aa7.14□□□□□ -1.27
NXF1-212ENST00000531872 TRMT6Q9UJA5 497 aaKnown RBP7.14□□□□□ -1.27
NXF1-212ENST00000531872 CNOT11Q9UKZ1 510 aaKnown RBP7.14□□□□□ -1.27
NXF1-212ENST00000531872 DAPP1Q9UN19 280 aa7.14□□□□□ -1.27
NXF1-212ENST00000531872 REXO2Q9Y3B8 237 aaKnown RBP7.14□□□□□ -1.27
NXF1-212ENST00000531872 BOLA1Q9Y3E2 137 aa7.14□□□□□ -1.27
NXF1-212ENST00000531872 CHCHD2Q9Y6H1 151 aaPredicted RBP7.14□□□□□ -1.27
NXF1-212ENST00000531872 EPN1Q9Y6I3 576 aaPredicted RBP7.14□□□□□ -1.27
NXF1-212ENST00000531872 A0A0G2JN53 185 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 ZCWPW2A0A1B0GU75 182 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 MYOCOSA0A1B0GUC4 107 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 ANKRD33BA6NCL7 494 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 LRIT2A6NDA9 550 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 A8MXE2 369 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 ERI3O43414 337 aaKnown RBP7.13□□□□□ -1.27
NXF1-212ENST00000531872 B3GALT2O43825 422 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 HAUS5O94927 633 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 TBX6O95947 436 aaPredicted RBP7.13□□□□□ -1.27
NXF1-212ENST00000531872 FTCDO95954 541 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 IGKV3-11P04433 115 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 FBXO45P0C2W1 286 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 SAT1P21673 171 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 GDF1P27539 372 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 MC3RP41968 323 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 PCYT1AP49585 367 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 CDK9P50750 372 aaKnown RBP7.13□□□□□ -1.27
NXF1-212ENST00000531872 LIM2P55344 173 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 DMTNQ08495 405 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 STX4Q12846 297 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 SNX1Q13596 522 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 THOC5Q13769 683 aaKnown RBP7.13□□□□□ -1.27
NXF1-212ENST00000531872 SERTAD2Q14140 314 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 EFTUD2Q15029 972 aaKnown RBP eCLIP7.13□□□□□ -1.272e-6■■■■■ 34.9
NXF1-212ENST00000531872 ADPRMQ3LIE5 342 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 DCST1Q5T197 706 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 PAQR3Q6TCH7 311 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 ADGRE4PQ86SQ3 457 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 TMPRSS11BQ86T26 416 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 HIPK1Q86Z02 1210 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 C9orf40Q8IXQ3 194 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 LMNTD2Q8IXW0 634 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.13□□□□□ -1.27
NXF1-212ENST00000531872 KLHDC8AQ8IYD2 350 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 MYO1HQ8N1T3 1032 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 OR10G3Q8NGC4 313 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 ZPLD1Q8TCW7 415 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 ATL1Q8WXF7 558 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 TSNARE1Q96NA8 513 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 ZFP3Q96NJ6 502 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 DOHHQ9BU89 302 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 UGT2B28Q9BY64 529 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 UBTD1Q9HAC8 227 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 ZNF701Q9NV72 531 aaPredicted RBP7.13□□□□□ -1.27
NXF1-212ENST00000531872 ARL15Q9NXU5 204 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 ADGRE2Q9UHX3 823 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 CAMK2AQ9UQM7 478 aa7.13□□□□□ -1.27
NXF1-212ENST00000531872 ABCA1O95477 2261 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 A0A088AWK7 358 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 MAGEB16A2A368 324 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 RCBTB2O95199 551 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 ACSL3O95573 720 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 NID1P14543 1247 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 TNNI3P19429 210 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 ZNF10P21506 573 aaPredicted RBP7.12□□□□□ -1.27
NXF1-212ENST00000531872 CRYGSP22914 178 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 LOXP28300 417 aaPredicted RBP7.12□□□□□ -1.27
NXF1-212ENST00000531872 SERPINB3P29508 390 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 SOX18P35713 384 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 SLCO1A2P46721 670 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 CPA2P48052 419 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 TNK1Q13470 666 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 RCN2Q14257 317 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 CCNG2Q16589 344 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 NTRK2Q16620 822 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 TBCELQ5QJ74 424 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 FNDC7Q5VTL7 733 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 DRICH1Q6PGQ1 229 aaPredicted RBP7.12□□□□□ -1.27
NXF1-212ENST00000531872 CAND1Q86VP6 1230 aaKnown RBP7.12□□□□□ -1.27
NXF1-212ENST00000531872 THOC6Q86W42 341 aaKnown RBP7.12□□□□□ -1.27
NXF1-212ENST00000531872 SYCE1Q8N0S2 351 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 MEIOBQ8N635 442 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 TTLQ8NG68 377 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 OR2L5Q8NG80 312 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 GABPB2Q8TAK5 448 aaPredicted RBP7.12□□□□□ -1.27
NXF1-212ENST00000531872 ZNF669Q96BR6 464 aaPredicted RBP7.12□□□□□ -1.27
NXF1-212ENST00000531872 LINGO1Q96FE5 620 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 SENP5Q96HI0 755 aaPredicted RBP7.12□□□□□ -1.27
NXF1-212ENST00000531872 MARK4Q96L34 752 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 ZNF597Q96LX8 424 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 JSRP1Q96MG2 331 aaPredicted RBP7.12□□□□□ -1.27
NXF1-212ENST00000531872 RUNDC3BQ96NL0 473 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 WFIKKN1Q96NZ8 548 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 UCN2Q96RP3 112 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 SERINC2Q96SA4 455 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 PIGMQ9H3S5 423 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 HOMER3Q9NSC5 361 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 TAS2R13Q9NYV9 303 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 COPS7AQ9UBW8 275 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 FETUBQ9UGM5 382 aa7.12□□□□□ -1.27
NXF1-212ENST00000531872 METRNQ9UJH8 293 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms