RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ZSCAN12O43309 604 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 TPST2O60704 377 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 PROP1O75360 226 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 E2F6O75461 281 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 EML2O95834 649 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 ANXA4P09525 319 aaPredicted RBP3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 ALPIP09923 528 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 NHLRC4P0CG21 123 aaPredicted RBP3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 ACP2P11117 423 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 UQCRBP14927 111 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 NT5EP21589 574 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 RBMS1P29558 406 aaKnown RBP3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 AHRP35869 848 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 EPS15P42566 896 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 OR1G1P47890 313 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 FNTAP49354 379 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 EIF3EP60228 445 aaKnown RBP3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 SP3Q02447 781 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 MAP2K1Q02750 393 aaPredicted RBP3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 ACY1Q03154 408 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 SRSF1Q07955 248 aaKnown RBP eCLIP3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 BST1Q10588 318 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 EFEMP1Q12805 493 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 ITGA9Q13797 1035 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 GPR18Q14330 331 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 SYCP1Q15431 976 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 PARP6Q2NL67 630 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 KRT71Q3SY84 523 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 FSCBQ5H9T9 825 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 WASHC2DQ5SRD0 308 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 ATF7IP2Q5U623 682 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 LIPKQ5VXJ0 399 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 TCEAL6Q6IPX3 200 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 PYHIN1Q6K0P9 492 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 Q6ZSV7 163 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 CENPQQ7L2Z9 268 aaPredicted RBP3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 AMIGO2Q86SJ2 522 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 ZNF554Q86TJ5 538 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 SEMA6DQ8NFY4 1073 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 OR5D13Q8NGL4 314 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 WDR36Q8NI36 951 aaKnown RBP3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 ABTB1Q969K4 478 aaPredicted RBP3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 LRRC39Q96DD0 335 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 AKR1E2Q96JD6 320 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 C12orf66Q96MD2 445 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 NSMCE3Q96MG7 304 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 KRT12Q99456 494 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 NPAS2Q99743 824 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 CHRDL1Q9BU40 450 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 MAGT1Q9H0U3 335 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 POLR3FQ9H1D9 316 aaPredicted RBP3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 HAUS4Q9H6D7 363 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 ZFP14Q9HCL3 533 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 RNF186Q9NXI6 227 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 HACD3Q9P035 362 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 MIOXQ9UGB7 285 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 CDH9Q9ULB4 789 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 DIMT1Q9UNQ2 313 aaKnown RBP3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 NCKAP1Q9Y2A7 1128 aa3.93□□□□□ -1.78
AC055878.1-201ENST00000531858 FGD5Q6ZNL6 1462 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 hDV102S1A0JD36 115 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 GRID2IPA4D2P6 1211 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 TMEM191CA6NGB0 347 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 ZNF879B4DU55 563 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 GOLGA8SH3BPF8 625 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 KLF11O14901 512 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 WDR1O75083 606 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 PRKRAO75569 313 aaKnown RBP3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 DFFBO76075 338 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 STK17BO94768 372 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 CYP1A2P05177 515 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 TMEM191BP0C7N4 346 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 CPN1P15169 458 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 PRKACAP17612 351 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 CPN2P22792 545 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 ACKR3P25106 362 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 RDXP35241 583 aaKnown RBP3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 TMPOP42166 694 aaKnown RBP3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 AMTP48728 403 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 NPY2RP49146 381 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 LIMK2P53671 638 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 HERV-K104P61576 105 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 MECOMQ03112 1051 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 FOXF2Q12947 444 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 TAF10Q12962 218 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 EXOSC2Q13868 293 aaKnown RBP3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 LINC01620Q4KN68 170 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 DDI2Q5TDH0 399 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 RAET1LQ5VY80 246 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 LRRC66Q68CR7 880 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 ZSCAN25Q6NSZ9 544 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 TRMT1LQ7Z2T5 733 aaKnown RBP3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 RANBP3LQ86VV4 465 aaPredicted RBP3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 TGIF2LXQ8IUE1 241 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 WDR49Q8IV35 697 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 VSTM4Q8IW00 320 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 ELMOD1Q8N336 334 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 C17orf47Q8NEP4 570 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 BBS1Q8NFJ9 593 aa3.92□□□□□ -1.78
AC055878.1-201ENST00000531858 RDH11Q8TC12 318 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms