RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 AP2B1P63010 937 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 OCRLQ01968 901 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 EEF1A2Q05639 463 aaKnown RBP14.34□□□□□ -0.11
CCS-206ENST00000530961 PCOLCEQ15113 449 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 SFT2D3Q587I9 215 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 OR52E8Q6IFG1 317 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 LANCL3Q6ZV70 420 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 PRICKLE2Q7Z3G6 844 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 OR2T11Q8NH01 316 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 TTC9Q92623 222 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 C19orf60Q96EN9 201 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 ARHGAP9Q9BRR9 750 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 ALOXE3Q9BYJ1 711 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 VTI1BQ9UEU0 232 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 PSME2Q9UL46 239 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 PCDHA9Q9Y5H5 950 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 CLDN16Q9Y5I7 305 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 MGAQ8IWI9 3026 aa14.34□□□□□ -0.11
CCS-206ENST00000530961 LSM1O15116 133 aaKnown RBP14.33□□□□□ -0.12
CCS-206ENST00000530961 SKAP2O75563 359 aaPredicted RBP14.33□□□□□ -0.12
CCS-206ENST00000530961 GPR75O95800 540 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 HK2P52789 917 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 TAS2R50P59544 299 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 ZNF763Q0D2J5 394 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 HEPACAMQ14CZ8 416 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 TERF2Q15554 542 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 EXT1Q16394 746 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 SMU1Q2TAY7 513 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 ATP6AP1LQ52LC2 224 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 PLAG1Q6DJT9 500 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 NOXRED1Q6NXP6 359 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 RIPOR1Q6ZS17 1223 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 C16orf78Q8WTQ4 265 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 ANKRD9Q96BM1 317 aaPredicted RBP14.33□□□□□ -0.12
CCS-206ENST00000530961 RBM18Q96H35 190 aaKnown RBP14.33□□□□□ -0.12
CCS-206ENST00000530961 FCRL1Q96LA6 429 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 IMMP1LQ96LU5 166 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 C7orf26Q96N11 449 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 MESP1Q9BRJ9 268 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 ADNPQ9H2P0 1102 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 ZNF160Q9HCG1 818 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 ADAP2Q9NPF8 381 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 PNPOQ9NVS9 261 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 TEX10Q9NXF1 929 aaPredicted RBP14.33□□□□□ -0.12
CCS-206ENST00000530961 TUBD1Q9UJT1 453 aa14.33□□□□□ -0.12
CCS-206ENST00000530961 G3BP2Q9UN86 482 aaKnown RBP14.33□□□□□ -0.12
CCS-206ENST00000530961 IGHV3-20A0A0C4DH32 117 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 HDAC3O15379 428 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 LDB3O75112 727 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 VPS4BO75351 444 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 IFNA16P05015 189 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 SFTPCP11686 197 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 MAPK1P28482 360 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 CCL11P51671 97 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 POLE2P56282 527 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 IGLV3-21P80748 117 aaPredicted RBP14.32□□□□□ -0.12
CCS-206ENST00000530961 FOLH1Q04609 750 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 PDCD2Q16342 344 aaPredicted RBP14.32□□□□□ -0.12
CCS-206ENST00000530961 LINC00303Q3SY05 128 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 RFTN2Q52LD8 501 aaPredicted RBP14.32□□□□□ -0.12
CCS-206ENST00000530961 IRAK1BP1Q5VVH5 260 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 CPZQ66K79 652 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 PAPD4Q6PIY7 484 aaKnown RBP14.32□□□□□ -0.12
CCS-206ENST00000530961 RGS9BPQ6ZS82 235 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 CLNKQ7Z7G1 428 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 CRLF3Q8IUI8 442 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 PARP9Q8IXQ6 854 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 KBTBD2Q8IY47 623 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 LRRC34Q8IZ02 419 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 TMEM132CQ8N3T6 1108 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 GALNT16Q8N428 558 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 DNAJB14Q8TBM8 379 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 PIWIL2Q8TC59 973 aaKnown RBP14.32□□□□□ -0.12
CCS-206ENST00000530961 CKAP2Q8WWK9 683 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 TUBGCP3Q96CW5 907 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 C3orf30Q96M34 536 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 MAGEB18Q96M61 343 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 WDR77Q9BQA1 342 aaPredicted RBP14.32□□□□□ -0.12
CCS-206ENST00000530961 PELOQ9BRX2 385 aaKnown RBP14.32□□□□□ -0.12
CCS-206ENST00000530961 SEMA4CQ9C0C4 833 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 EHD3Q9NZN3 535 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 DLGAP4Q9Y2H0 992 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 POLR3HQ9Y535 204 aaPredicted RBP14.32□□□□□ -0.12
CCS-206ENST00000530961 PCM1Q15154 2024 aa14.32□□□□□ -0.12
CCS-206ENST00000530961 SNRNP200O75643 2136 aaKnown RBP14.32□□□□□ -0.12
CCS-206ENST00000530961 ATP6AP2A0A1C7CYW4 349 aa14.31□□□□□ -0.12
CCS-206ENST00000530961 GLOD5A6NK44 160 aa14.31□□□□□ -0.12
CCS-206ENST00000530961 TRPC5OSA6NMA1 111 aa14.31□□□□□ -0.12
CCS-206ENST00000530961 MKRN2OSH3BPM6 223 aa14.31□□□□□ -0.12
CCS-206ENST00000530961 TGFBR3LH3BV60 316 aa14.31□□□□□ -0.12
CCS-206ENST00000530961 PGRMC2O15173 223 aa14.31□□□□□ -0.12
CCS-206ENST00000530961 FGF17O60258 216 aa14.31□□□□□ -0.12
CCS-206ENST00000530961 PEX11AO75192 247 aa14.31□□□□□ -0.12
CCS-206ENST00000530961 PRKRAO75569 313 aaKnown RBP14.31□□□□□ -0.12
CCS-206ENST00000530961 ATP6AP2O75787 350 aa14.31□□□□□ -0.12
CCS-206ENST00000530961 CEACAM4O75871 244 aa14.31□□□□□ -0.12
CCS-206ENST00000530961 SEC24DO94855 1032 aaPredicted RBP14.31□□□□□ -0.12
CCS-206ENST00000530961 SERPINA7P05543 415 aa14.31□□□□□ -0.12
CCS-206ENST00000530961 IL3P08700 152 aa14.31□□□□□ -0.12
CCS-206ENST00000530961 SPTBP11277 2137 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms