RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 GDPD4Q6W3E5 623 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 B3GNT7Q8NFL0 401 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 ZNF671Q8TAW3 534 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 MYEOVQ96EZ4 313 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 SERHL2Q9H4I8 314 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 SERHLQ9NQF3 203 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 SIRT5Q9NXA8 310 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 PRSS21Q9Y6M0 314 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 SCN4AP35499 1836 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 SBF1O95248 1867 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 AHCTF1Q8WYP5 2266 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 ORC5O43913 435 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 NME6O75414 186 aaPredicted RBP17.12■□□□□ 0.33
LTBP3-210ENST00000528516 NAT2P11245 290 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 GARNL3Q5VVW2 1013 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 ANKRD54Q6NXT1 300 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 MACC1Q6ZN28 852 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 TPRG1Q6ZUI0 275 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 USP30Q70CQ3 517 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 CREB3L2Q70SY1 520 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 COMMD7Q86VX2 200 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 TMEM25Q86YD3 366 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 OR14C36Q8NHC7 312 aa17.12■□□□□ 0.33
LTBP3-210ENST00000528516 SMG7Q92540 1137 aaKnown RBP17.12■□□□□ 0.33
LTBP3-210ENST00000528516 GRXCR2A6NFK2 248 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 WWP2O00308 870 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 ZNF250P15622 560 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 ABATP80404 500 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 IFI44LQ53G44 452 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 DCST1Q5T197 706 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 ZNF367Q7RTV3 350 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 RNF130Q86XS8 419 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 APH1BQ8WW43 257 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 OR51V1Q9H2C8 321 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 LINC00597Q9H2U6 94 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 LEFTY1O75610 366 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 GPX5O75715 221 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 TP53P04637 393 aaPredicted RBP17.11■□□□□ 0.33
LTBP3-210ENST00000528516 LAMP1P11279 417 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 FGFBP1Q14512 234 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 FXNQ16595 210 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 KIAA1161Q6NSJ0 714 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 FGD2Q7Z6J4 655 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 IQCHQ86VS3 1027 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 OOSP2Q86WS3 158 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 C10orf111Q8N326 155 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 PGAP3Q96FM1 320 aaPredicted RBP17.11■□□□□ 0.33
LTBP3-210ENST00000528516 RNF170Q96K19 258 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 RACGAP1Q9H0H5 632 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 POLR2J3Q9H1A7 115 aaKnown RBP17.11■□□□□ 0.33
LTBP3-210ENST00000528516 C12orf10Q9HB07 376 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 IL20RAQ9UHF4 553 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 TNFRSF10BO14763 440 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 POP7O75817 140 aaKnown RBP17.11■□□□□ 0.33
LTBP3-210ENST00000528516 KLKB1P03952 638 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 ETFAP13804 333 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 ZNF8P17098 575 aaPredicted RBP17.11■□□□□ 0.33
LTBP3-210ENST00000528516 SRSF11Q05519 484 aaKnown RBP17.11■□□□□ 0.33
LTBP3-210ENST00000528516 SCARB2Q14108 478 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 ZNF730Q6ZMV8 503 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 UBE2Q1Q7Z7E8 422 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 ATP6V1C2Q8NEY4 427 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 POF1BQ8WVV4 589 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 DPF3Q92784 378 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 DPCDQ9BVM2 203 aaPredicted RBP17.11■□□□□ 0.33
LTBP3-210ENST00000528516 KCNK6Q9Y257 313 aa17.11■□□□□ 0.33
LTBP3-210ENST00000528516 PRAMEF33A0A0G2JMD5 474 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 TRBC2A0A5B9 178 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 PRAMEF10O60809 474 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 SYN1P17600 705 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 KDELR2P33947 212 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 RPA4Q13156 261 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 GALEQ14376 348 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 LIPKQ5VXJ0 399 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 GRASPQ7Z6J2 395 aaPredicted RBP17.1■□□□□ 0.33
LTBP3-210ENST00000528516 RIT1Q92963 219 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 PEX13Q92968 403 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 H7BY64 318 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 EVI2BP34910 448 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 KIR2DL3P43628 341 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 MAN2A2P49641 1150 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 CLCNKAP51800 687 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 CEACAM20Q6UY09 585 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 MSRB3Q8IXL7 192 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 SDR16C5Q8N3Y7 309 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 SLC5A8Q8N695 610 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 PRAP1Q96NZ9 151 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 MED28Q9H204 178 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 GALNT9Q9HCQ5 603 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 SRRDQ9UH36 339 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 RIMKLBQ9ULI2 386 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 INSL5Q9Y5Q6 135 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 NPIPB15A6NHN6 443 aaPredicted RBP17.1■□□□□ 0.33
LTBP3-210ENST00000528516 WASHC1A8K0Z3 465 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 ATXN1LP0C7T5 689 aaKnown RBP17.1■□□□□ 0.33
LTBP3-210ENST00000528516 DGKGP49619 791 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 ID2Q02363 134 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 ZMYND11Q15326 602 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 TEAD2Q15562 447 aa17.1■□□□□ 0.33
LTBP3-210ENST00000528516 IZUMO1Q8IYV9 350 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms