RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 MRPS14O60783 128 aaKnown RBP13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 CLIC3O95833 236 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 CCDC159P0C7I6 412 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 SMIM10L1P0DMW3 83 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 CTSEP14091 401 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 UGT2B7P16662 529 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 JUNBP17275 347 aaPredicted RBP13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 NELFEP18615 380 aaKnown RBP13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 AQP1P29972 269 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 BUD31P41223 144 aaPredicted RBP13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 KHKP50053 298 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 DAPP51397 102 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 NCBP2P52298 156 aaKnown RBP eCLIP13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 UBE2IP63279 158 aaKnown RBP13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 SMAD2Q15796 467 aaKnown RBP13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 BROXQ5VW32 411 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 FBXO42Q6P3S6 717 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 ZNF773Q6PK81 442 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 FIGLAQ6QHK4 219 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 CEP68Q76N32 757 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 GPR141Q7Z602 305 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 TSPYL5Q86VY4 417 aaPredicted RBP13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 CYP4Z1Q86W10 505 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 HS3ST5Q8IZT8 346 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 HORMAD2Q8N7B1 307 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 ATG16L2Q8NAA4 619 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 OR8K5Q8NH50 307 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 MIPOL1Q8TD10 442 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 ZFAND2BQ8WV99 257 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 ZNF566Q969W8 418 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 SMIM10Q96HG1 83 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 SLC35G5Q96KT7 338 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 SERINC2Q96SA4 455 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 NELL2Q99435 816 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 PSD2Q9BQI7 771 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 ABCG4Q9H172 646 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 LMAN1LQ9HAT1 526 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 C3orf14Q9HBI5 128 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 KRT84Q9NSB2 600 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 EXD2Q9NVH0 621 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 VNN3Q9NY84 501 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 PTTG2Q9NZH5 202 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 CPNE7Q9UBL6 633 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 APOBEC3BQ9UH17 382 aaKnown RBP13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 CES1P1Q9UKY3 287 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 CYP8B1Q9UNU6 501 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 ZNF780BQ9Y6R6 833 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 FANCMQ8IYD8 2048 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 ARRDC5A6NEK1 342 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 BCKDKO14874 412 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 SCAMP1O15126 338 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 IFNW1P05000 195 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 FHP07954 510 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 THEGLP0DJG4 465 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 MATN1P21941 496 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 TLX1P31314 330 aaPredicted RBP13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 RRM2P31350 389 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 SMIM11AP58511 58 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 ISL1P61371 349 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 PRR5P85299 388 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 EIF2B5Q13144 721 aaKnown RBP13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 TUBA3CQ13748 450 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 SIM2Q14190 667 aaPredicted RBP13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 GPR18Q14330 331 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 B3GNT6Q6ZMB0 384 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 ABHD13Q7L211 337 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 GALNT10Q86SR1 603 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 KRT73Q86Y46 540 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 GJD3Q8N144 294 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 GALNT15Q8N3T1 639 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 AMER3Q8N944 861 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 BBS10Q8TAM1 723 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 SLC38A5Q8WUX1 472 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 PROX1Q92786 737 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 SHDQ96IW2 340 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 MAGED4Q96JG8 741 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 OR2A5Q96R48 311 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 PIP5K1AQ99755 562 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 BCL2L10Q9HD36 194 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 RAB23Q9ULC3 237 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 ATG4BQ9Y4P1 393 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 ENPP4Q9Y6X5 453 aa13.98□□□□□ -0.17
ECHDC1-220ENST00000528402 BRWD1Q9NSI6 2320 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 MYOCOSA0A1B0GUC4 107 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 OR6C74A6NCV1 312 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 CCDC160A6NGH7 325 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 EMC8O43402 210 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 ASNA1O43681 348 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 AIFM1O95831 613 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 CRHBPP24387 322 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 XCR1P46094 333 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 PXNP49023 591 aaPredicted RBP13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 CDK9P50750 372 aaKnown RBP13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 NUP107P57740 925 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 BTN3A2P78410 334 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 MICAQ29983 383 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 FAM92BQ6ZTR7 304 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 VN1R4Q7Z5H5 301 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 TAF8Q7Z7C8 310 aa13.97□□□□□ -0.17
ECHDC1-220ENST00000528402 IQCHQ86VS3 1027 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms