RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ETV5P41161 510 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 ETV1P50549 477 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 AP1S2P56377 157 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 EEF1A2Q05639 463 aaKnown RBP13.97□□□□□ -0.17
CAPN1-214ENST00000528165 BCL2L1Q07817 233 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 CCDC85BQ15834 202 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-214ENST00000528165 OCLNQ16625 522 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 CCL15Q16663 113 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 ZNF57Q68EA5 555 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-214ENST00000528165 METAP1DQ6UB28 335 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-214ENST00000528165 VRK3Q8IV63 474 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 OR52I1Q8NGK6 324 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 HUS1BQ8NHY5 278 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 ACAT2Q9BWD1 397 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 BHLHE41Q9C0J9 482 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-214ENST00000528165 POLR2J3Q9H1A7 115 aaKnown RBP13.97□□□□□ -0.17
CAPN1-214ENST00000528165 SGK2Q9HBY8 427 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 TVP23BQ9NYZ1 205 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 KCND3Q9UK17 655 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 ING4Q9UNL4 249 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 MGAT4BQ9UQ53 548 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 HEPACAM2A8MVW5 462 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 I3L521 148 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 STK25O00506 426 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 FABP7O15540 132 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 GJB5O95377 273 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 NR2F6P10588 404 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 HSD3B1P14060 373 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 DDX5P17844 614 aaKnown RBP13.97□□□□□ -0.17
CAPN1-214ENST00000528165 HSD3B2P26439 372 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 IRS1P35568 1242 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 PER3P56645 1201 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 WNT4P56705 351 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 WDR5P61964 334 aaKnown RBP13.97□□□□□ -0.17
CAPN1-214ENST00000528165 CDH18Q13634 790 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 GLB1LQ6UWU2 654 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 CEACAM20Q6UY09 585 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 TPGS1Q6ZTW0 290 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 GOT1L1Q8NHS2 421 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-214ENST00000528165 TM9SF2Q99805 663 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 SOSTQ9BQB4 213 aa13.97□□□□□ -0.17
CAPN1-214ENST00000528165 PPIL3Q9H2H8 161 aaKnown RBP13.97□□□□□ -0.17
CAPN1-214ENST00000528165 FFAR1O14842 300 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 TLX2O43763 284 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-214ENST00000528165 PCBP3P57721 371 aaKnown RBP13.96□□□□□ -0.17
CAPN1-214ENST00000528165 SP140Q13342 867 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 MRPL58Q14197 206 aaKnown RBP13.96□□□□□ -0.17
CAPN1-214ENST00000528165 MBTPS1Q14703 1052 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 SPIN4Q56A73 249 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 DCST1Q5T197 706 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 BICRALQ6AI39 1079 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 ADNP2Q6IQ32 1131 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 GPR26Q8NDV2 337 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 ZNF431Q8TF32 576 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-214ENST00000528165 TM9SF4Q92544 642 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 CREB3L1Q96BA8 519 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.96□□□□□ -0.17
CAPN1-214ENST00000528165 BRF2Q9HAW0 419 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 RC3H2Q9HBD1 1191 aaKnown RBP13.96□□□□□ -0.17
CAPN1-214ENST00000528165 TMEM161AQ9NX61 479 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 PHF11Q9UIL8 331 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 ELF5Q9UKW6 265 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-214ENST00000528165 MTMR11A4FU01 709 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 K7ERQ8 282 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 PLOD3O60568 738 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 IRF1P10914 325 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 TIA1P31483 386 aaKnown RBP eCLIP13.96□□□□□ -0.171e-10■□□□□ 11.1
CAPN1-214ENST00000528165 LIM2P55344 173 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 POU6F2P78424 691 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-214ENST00000528165 B4GALNT1Q00973 533 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 SLC5A12Q1EHB4 618 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 ADGRF1Q5T601 910 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 PXDC1Q5TGL8 231 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 TEX261Q6UWH6 196 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 SERINC5Q86VE9 423 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 THOC6Q86W42 341 aaKnown RBP13.96□□□□□ -0.17
CAPN1-214ENST00000528165 TIGD4Q8IY51 512 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 CELF5Q8N6W0 485 aaKnown RBP13.96□□□□□ -0.17
CAPN1-214ENST00000528165 NACC2Q96BF6 587 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 CXorf40BQ96DE9 158 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 C19orf43Q9BQ61 176 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 WACQ9BTA9 647 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 WRAP53Q9BUR4 548 aaKnown RBP13.96□□□□□ -0.17
CAPN1-214ENST00000528165 TMEM121BQ9BXQ6 578 aaPredicted RBP13.96□□□□□ -0.17
CAPN1-214ENST00000528165 REEP4Q9H6H4 257 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 GKN1Q9NS71 199 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 GULP1Q9UBP9 304 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 SLC45A1Q9Y2W3 748 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 CDH10Q9Y6N8 788 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 U3KQ87 197 aa13.96□□□□□ -0.17
CAPN1-214ENST00000528165 PSIP1O75475 530 aaKnown RBP13.96□□□□□ -0.18
CAPN1-214ENST00000528165 MPC1LP0DKB6 136 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 LHCGRP22888 699 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 PTBP1P26599 531 aaKnown RBP eCLIP13.96□□□□□ -0.18
CAPN1-214ENST00000528165 WEE1P30291 646 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 GKP32189 559 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 SOAT1P35610 550 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 EVX1P49640 407 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 SEMG2Q02383 582 aa13.96□□□□□ -0.18
CAPN1-214ENST00000528165 DUSP4Q13115 394 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms