RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 COPS7AQ9UBW8 275 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 FETUBQ9UGM5 382 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 PHF11Q9UIL8 331 aa13.19□□□□□ -0.3
CAPN1-212ENST00000527887 A0A096LPK6 155 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 C17orf105B2RV13 164 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 OR2J2O76002 312 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 CLDN14O95500 239 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 TYK2P29597 1187 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 PTGS2P35354 604 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 STT3AP46977 705 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 SERPINB8P50452 374 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 RAP1GDS1P52306 607 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 RNF4P78317 190 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 IGLV3-21P80748 117 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-212ENST00000527887 TBL3Q12788 808 aaKnown RBP13.18□□□□□ -0.3
CAPN1-212ENST00000527887 SLAMF1Q13291 335 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 CUL3Q13618 768 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 RASA2Q15283 850 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 PFKFB4Q16877 469 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 MPEG1Q2M385 716 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 C10orf62Q5T681 223 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-212ENST00000527887 ARHGAP11AQ6P4F7 1023 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 OPN5Q6U736 354 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 MDGA2Q7Z553 956 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 GPR180Q86V85 440 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 CHERPQ8IWX8 916 aaKnown RBP13.18□□□□□ -0.3
CAPN1-212ENST00000527887 GOLM1Q8NBJ4 401 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 PSD4Q8NDX1 1056 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 HUS1BQ8NHY5 278 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 AGAP11Q8TF27 550 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 KCTD4Q8WVF5 259 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 UBLCP1Q8WVY7 318 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-212ENST00000527887 ANKRD9Q96BM1 317 aaPredicted RBP13.18□□□□□ -0.3
CAPN1-212ENST00000527887 RBM18Q96H35 190 aaKnown RBP13.18□□□□□ -0.3
CAPN1-212ENST00000527887 DGAT2Q96PD7 388 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 ZIM3Q96PE6 472 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 RASL10BQ96S79 203 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 PELOQ9BRX2 385 aaKnown RBP13.18□□□□□ -0.3
CAPN1-212ENST00000527887 EPB41L4BQ9H329 900 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 OR51B5Q9H339 312 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 CDC42EP4Q9H3Q1 356 aaKnown RBP13.18□□□□□ -0.3
CAPN1-212ENST00000527887 ACSS3Q9H6R3 686 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 RPF2Q9H7B2 306 aaKnown RBP13.18□□□□□ -0.3
CAPN1-212ENST00000527887 ACTR8Q9H981 624 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 PLSCR2Q9NRY7 297 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.18□□□□□ -0.3
CAPN1-212ENST00000527887 TMCO1Q9UM00 188 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 PPT2Q9UMR5 302 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 CROCCQ5TZA2 2017 aa13.18□□□□□ -0.3
CAPN1-212ENST00000527887 HMX2A2RU54 273 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 ACOT7O00154 380 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 FOXE1O00358 373 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-212ENST00000527887 RTCAO00442 366 aaKnown RBP13.17□□□□□ -0.3
CAPN1-212ENST00000527887 PRKNO60260 465 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-212ENST00000527887 LDB3O75112 727 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 RBP1P09455 135 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 CNR1P21554 472 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 BUD31P41223 144 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-212ENST00000527887 HK2P52789 917 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 SLC29A2Q14542 456 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 NDUFAF5Q5TEU4 345 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 TMEM211Q6ICI0 200 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 MYO7BQ6PIF6 2116 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 IL20RBQ6UXL0 311 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 RTL4Q6ZR62 310 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 TAOK1Q7L7X3 1001 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 MCEMP1Q8IX19 187 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 DND1Q8IYX4 353 aaKnown RBP13.17□□□□□ -0.3
CAPN1-212ENST00000527887 SLC15A4Q8N697 577 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 L3MBTL4Q8NA19 623 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 NUBPLQ8TB37 319 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 FAM57AQ8TBR7 257 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 SLC2A12Q8TD20 617 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 MTFMTQ96DP5 389 aaKnown RBP13.17□□□□□ -0.3
CAPN1-212ENST00000527887 SENP5Q96HI0 755 aaPredicted RBP13.17□□□□□ -0.3
CAPN1-212ENST00000527887 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 DMRTA2Q96SC8 542 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 OR8D2Q9GZM6 311 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 DMRT3Q9NQL9 472 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 NINJ2Q9NZG7 142 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 COQ3Q9NZJ6 369 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 CACNA1DQ01668 2161 aa13.17□□□□□ -0.3
CAPN1-212ENST00000527887 A0A087WUV0 522 aaPredicted RBP13.16□□□□□ -0.3
CAPN1-212ENST00000527887 GOLGA6L10A6NI86 522 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 WWP2O00308 870 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 PLPP1O14494 284 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 HS6ST1O60243 411 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 ALDOAP04075 364 aaKnown RBP13.16□□□□□ -0.3
CAPN1-212ENST00000527887 COL6A2P12110 1019 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 COX6B1P14854 86 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 CNTFP26441 200 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 GRNP28799 593 aaKnown RBP13.16□□□□□ -0.3
CAPN1-212ENST00000527887 GALNSP34059 522 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 PTGER1P34995 402 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 GMPRP36959 345 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 SERPINB9P50453 376 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 PLIN5Q00G26 463 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 GTF2H2Q13888 395 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 CMPK2Q5EBM0 449 aa13.16□□□□□ -0.3
CAPN1-212ENST00000527887 PIGGQ5H8A4 983 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms