RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 MAPK1P28482 360 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 TPP2P29144 1249 aaPredicted RBP16.25■□□□□ 0.19
CCS-204ENST00000526066 OTX2P32243 289 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 GSTM5P46439 218 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 ARFIP2P53365 341 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 TRA2BP62995 288 aaKnown RBP16.25■□□□□ 0.19
CCS-204ENST00000526066 RPL38P63173 70 aaKnown RBP16.25■□□□□ 0.19
CCS-204ENST00000526066 RAE1P78406 368 aaKnown RBP16.25■□□□□ 0.19
CCS-204ENST00000526066 RAPSNQ13702 412 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 ATP1A4Q13733 1029 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 NCF4Q15080 339 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 LSM12Q3MHD2 195 aaKnown RBP16.25■□□□□ 0.19
CCS-204ENST00000526066 ZNF385CQ66K41 422 aaPredicted RBP16.25■□□□□ 0.19
CCS-204ENST00000526066 MRM1Q6IN84 353 aaKnown RBP16.25■□□□□ 0.19
CCS-204ENST00000526066 NOXRED1Q6NXP6 359 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 PRSS41Q7RTY9 318 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 SPATA21Q7Z572 469 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 SPATA19Q7Z5L4 167 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 RBMXL3Q8N7X1 1067 aaKnown RBP16.25■□□□□ 0.19
CCS-204ENST00000526066 FNDC5Q8NAU1 212 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 SLC38A9Q8NBW4 561 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 FER1L6-AS2Q96M78 137 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 SMAD5Q99717 465 aaKnown RBP16.25■□□□□ 0.19
CCS-204ENST00000526066 ELAC2Q9BQ52 826 aaKnown RBP16.25■□□□□ 0.19
CCS-204ENST00000526066 SORBS1Q9BX66 1292 aaKnown RBP16.25■□□□□ 0.19
CCS-204ENST00000526066 TMEM120AQ9BXJ8 343 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 LYARQ9NX58 379 aaKnown RBP16.25■□□□□ 0.19
CCS-204ENST00000526066 GIMAP2Q9UG22 337 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 ERRFI1Q9UJM3 462 aaPredicted RBP16.25■□□□□ 0.19
CCS-204ENST00000526066 B3GNT3Q9Y2A9 372 aa16.25■□□□□ 0.19
CCS-204ENST00000526066 SPTBP11277 2137 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 ARHGAP10A1A4S6 786 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 ANKUB1A6NFN9 424 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 PCDH7O60245 1069 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 FAM107AO95990 144 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 B3GALT4O96024 378 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 LDLRP01130 860 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 KLK1P06870 262 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 CERS1P27544 350 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 IRX1P78414 480 aaPredicted RBP16.24■□□□□ 0.19
CCS-204ENST00000526066 DSG2Q14126 1118 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 SLC9A5Q14940 896 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 CCNYL2Q5T2Q4 361 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 NXNQ6DKJ4 435 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 PIGWQ7Z7B1 504 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 AMER3Q8N944 861 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 C10orf82Q8WW14 230 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 SNRNP40Q96DI7 357 aaKnown RBP16.24■□□□□ 0.19
CCS-204ENST00000526066 MMABQ96EY8 250 aaPredicted RBP16.24■□□□□ 0.19
CCS-204ENST00000526066 CCT8L2Q96SF2 557 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 FAM107BQ9H098 131 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 ZNF304Q9HCX3 659 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 LYRM4Q9HD34 91 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 NOP53Q9NZM5 478 aaKnown RBP16.24■□□□□ 0.19
CCS-204ENST00000526066 NDOR1Q9UHB4 597 aa16.24■□□□□ 0.19
CCS-204ENST00000526066 GPN3Q9UHW5 284 aaPredicted RBP16.24■□□□□ 0.19
CCS-204ENST00000526066 EIF3LQ9Y262 564 aaKnown RBP16.24■□□□□ 0.19
CCS-204ENST00000526066 WBP11Q9Y2W2 641 aaKnown RBP16.24■□□□□ 0.19
CCS-204ENST00000526066 SGK494L7N484 410 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 TMPRSS11DO60235 418 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 RDH16O75452 317 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 CLDN1O95832 211 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 CD63P08962 238 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 ANXA4P09525 319 aaPredicted RBP16.23■□□□□ 0.19
CCS-204ENST00000526066 PIM1P11309 404 aaPredicted RBP16.23■□□□□ 0.19
CCS-204ENST00000526066 PRPS2P11908 318 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 ITGAXP20702 1163 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 MAPK12P53778 367 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 DCDP81605 110 aaKnown RBP16.23■□□□□ 0.19
CCS-204ENST00000526066 SLAMF1Q13291 335 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 NKAIN1Q4KMZ8 207 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 METTL21CQ5VZV1 264 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 CYP20A1Q6UW02 462 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 FAM198BQ6UWH4 519 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 FAM9CQ8IZT9 166 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 DTWD1Q8N5C7 304 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 CISD2Q8N5K1 135 aaKnown RBP16.23■□□□□ 0.19
CCS-204ENST00000526066 ADAMTS18Q8TE60 1221 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 AGPAT4Q9NRZ5 378 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 ASF1BQ9NVP2 202 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 MS4A12Q9NXJ0 267 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 PHF11Q9UIL8 331 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 DAPP1Q9UN19 280 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 DLGAP4Q9Y2H0 992 aa16.23■□□□□ 0.19
CCS-204ENST00000526066 POLR3HQ9Y535 204 aaPredicted RBP16.23■□□□□ 0.19
CCS-204ENST00000526066 GNG14A0A1W2PPG7 69 aa16.22■□□□□ 0.19
CCS-204ENST00000526066 WIPF3A6NGB9 483 aa16.22■□□□□ 0.19
CCS-204ENST00000526066 ZNF860A6NHJ4 632 aa16.22■□□□□ 0.19
CCS-204ENST00000526066 GUCY1B2O75343 617 aa16.22■□□□□ 0.19
CCS-204ENST00000526066 CBX6O95503 412 aa16.22■□□□□ 0.19
CCS-204ENST00000526066 GBAP04062 536 aa16.22■□□□□ 0.19
CCS-204ENST00000526066 FAM58BPP0C7Q3 252 aa16.22■□□□□ 0.19
CCS-204ENST00000526066 BCKDHAP12694 445 aa16.22■□□□□ 0.19
CCS-204ENST00000526066 FBLP22087 321 aaKnown RBP16.22■□□□□ 0.19
CCS-204ENST00000526066 FOLR3P41439 243 aa16.22■□□□□ 0.19
CCS-204ENST00000526066 OR1D4P47884 311 aa16.22■□□□□ 0.19
CCS-204ENST00000526066 PER3P56645 1201 aa16.22■□□□□ 0.19
CCS-204ENST00000526066 ZNF763Q0D2J5 394 aa16.22■□□□□ 0.19
CCS-204ENST00000526066 RUNX2Q13950 521 aa16.22■□□□□ 0.19
CCS-204ENST00000526066 PLEKHN1Q494U1 663 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms