RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 HSD17B7P56937 341 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 CLDN2P57739 230 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 DCDC1P59894 354 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 RHAGQ02094 409 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 TMEM115Q12893 351 aaPredicted RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 ILF2Q12905 390 aaKnown RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 SRSF5Q13243 272 aaKnown RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 NFATC2Q13469 925 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 ITIH4Q14624 930 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 IRF4Q15306 451 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 PRTGQ2VWP7 1150 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 KLHL38Q2WGJ6 581 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 KBTBD12Q3ZCT8 623 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 ATP13A5Q4VNC0 1218 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 ALG10Q5BKT4 473 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 ALG10BQ5I7T1 473 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 HENMT1Q5T8I9 393 aaKnown RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 GRTP1Q5TC63 336 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 VWA5B1Q5TIE3 1220 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 MTFR2Q6P444 385 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 ENPP7Q6UWV6 458 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 Q6ZSR6 202 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 LDB1Q86U70 411 aaPredicted RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 IGFN1Q86VF2 1251 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 KCNMB4Q86W47 210 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 SERPINA9Q86WD7 417 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 LRRC6Q86X45 466 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 CPOQ8IVL8 374 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 CTAGE3PQ8IX95 158 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 MREGQ8N565 214 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 ZBTB44Q8NCP5 570 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 DENND6BQ8NEG7 585 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 OR8H1Q8NGG4 311 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 HEXDCQ8WVB3 486 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 DNASE2BQ8WZ79 361 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 KCNJ9Q92806 393 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 GLYATL1Q969I3 302 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.31□□□□□ -1.72
USP48-211ENST00000526044 ULK4Q96C45 1275 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 DCUN1D1Q96GG9 259 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 SERAC1Q96JX3 654 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 VPS35Q96QK1 796 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 CYTH2Q99418 400 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 KLF6Q99612 283 aaPredicted RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 APOOQ9BUR5 198 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 FUT8Q9BYC5 575 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 FAM234AQ9H0X4 552 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 GHITMQ9H3K2 345 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 EBF2Q9HAK2 575 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 PLAC1Q9HBJ0 212 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 G6PC2Q9NQR9 355 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 PHPT1Q9NRX4 125 aaPredicted RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 SLC22A11Q9NSA0 550 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 INTS10Q9NVR2 710 aaKnown RBP4.31□□□□□ -1.72
USP48-211ENST00000526044 NSMCE4AQ9NXX6 385 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 IL1RAPL1Q9NZN1 696 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 VPS18Q9P253 973 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 KIF17Q9P2E2 1029 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 TXNDC16Q9P2K2 825 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 FBXO5Q9UKT4 447 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 SCN8AQ9UQD0 1980 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 PLXNB3Q9ULL4 1909 aa4.31□□□□□ -1.72
USP48-211ENST00000526044 ZNF106Q9H2Y7 1883 aaKnown RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 NUMA1Q14980 2115 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 TRBV5-4A0A0C4DH59 114 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 EXOC1LA0A1B0GW35 172 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 FAM90A10PA6NDY2 464 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 CACNB4O00305 520 aaPredicted RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 DYNC1I1O14576 645 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 BCAT2O15382 392 aaPredicted RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 VEGFDO43915 354 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 MAGEC1O60732 1142 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 PIAS1O75925 651 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 CDK14O94921 469 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 TNFP01375 233 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 IFNA2P01563 188 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 SHBGP04278 402 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 INHBAP08476 426 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 ATP1B2P14415 290 aaPredicted RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 GNSP15586 552 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 TNFRSF1BP20333 461 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 OGNP20774 298 aaKnown RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 GSTM2P28161 218 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 TEAD1P28347 426 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 FOXN2P32314 431 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 HPDP32754 393 aaPredicted RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 CA5AP35218 305 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 SPRP35270 261 aaPredicted RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 GP5P40197 560 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 DPP6P42658 865 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 NSG1P42857 185 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 PTGER3P43115 390 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 RABIFP47224 123 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 THOP1P52888 689 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 EIF3BP55884 814 aaKnown RBP4.3□□□□□ -1.72
USP48-211ENST00000526044 PFN3P60673 137 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 CDK3Q00526 305 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 IFFO1Q0D2I5 559 aa4.3□□□□□ -1.72
USP48-211ENST00000526044 OVGP1Q12889 678 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms