RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 ASMTP46597 345 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 OR4D2P58180 307 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 RHDQ02161 417 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 DEFB109BQ30KR1 87 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 SFT2D3Q587I9 215 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 FAM71E1Q6IPT2 247 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 OGFOD2Q6N063 350 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 SLC48A1Q6P1K1 146 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 TMEM132CQ8N3T6 1108 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 APOBEC4Q8WW27 367 aaKnown RBP19.45■□□□□ 0.7
CD44-222ENST00000526025 STON2Q8WXE9 905 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 C8orf44Q96CB5 159 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 MAELQ96JY0 434 aaKnown RBP19.45■□□□□ 0.7
CD44-222ENST00000526025 LPAR4Q99677 370 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 WDR77Q9BQA1 342 aaPredicted RBP19.45■□□□□ 0.7
CD44-222ENST00000526025 AKTIPQ9H8T0 292 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 ADAP2Q9NPF8 381 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 PSME2Q9UL46 239 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 MGAQ8IWI9 3026 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 CACNA1BQ00975 2339 aa19.45■□□□□ 0.7
CD44-222ENST00000526025 ITPR1Q14643 2758 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 LOC400499M0QZD8 3231 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 NSG1A0A0A6YYJ2 146 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 SDHDO14521 159 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 LDB3O75112 727 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 PRKRAO75569 313 aaKnown RBP19.44■□□□□ 0.7
CD44-222ENST00000526025 BCKDHAP12694 445 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 ICAM2P13598 275 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 DDCP20711 480 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 MDH1P40925 334 aaKnown RBP19.44■□□□□ 0.7
CD44-222ENST00000526025 ERVK-8P63133 956 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 FOLH1Q04609 750 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 AIMP2Q13155 320 aaKnown RBP19.44■□□□□ 0.7
CD44-222ENST00000526025 ELAVL1Q15717 326 aaKnown RBP19.44■□□□□ 0.7
CD44-222ENST00000526025 LARP4Q71RC2 724 aaKnown RBP eCLIP19.44■□□□□ 0.7
CD44-222ENST00000526025 CLNKQ7Z7G1 428 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 SAMD14Q8IZD0 417 aaPredicted RBP19.44■□□□□ 0.7
CD44-222ENST00000526025 FNDC5Q8NAU1 212 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 CLEC1AQ8NC01 280 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 ACTRT2Q8TDY3 377 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 IMMP1LQ96LU5 166 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 ALOXE3Q9BYJ1 711 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 ATP13A2Q9NQ11 1180 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 TAS2R7Q9NYW3 318 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 NOP53Q9NZM5 478 aaKnown RBP19.44■□□□□ 0.7
CD44-222ENST00000526025 PPIEQ9UNP9 301 aaKnown RBP19.44■□□□□ 0.7
CD44-222ENST00000526025 EIF3LQ9Y262 564 aaKnown RBP19.44■□□□□ 0.7
CD44-222ENST00000526025 USH1CQ9Y6N9 552 aa19.44■□□□□ 0.7
CD44-222ENST00000526025 SAGE2PA6NJ88 616 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 PGRMC2O15173 223 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 TBX19O60806 448 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 EDF1O60869 148 aaKnown RBP19.43■□□□□ 0.7
CD44-222ENST00000526025 KITP10721 976 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 LBPP18428 481 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 PIK3R1P27986 724 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 STT3AP46977 705 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 PLIN5Q00G26 463 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 EEF1A2Q05639 463 aaKnown RBP19.43■□□□□ 0.7
CD44-222ENST00000526025 EXT1Q16394 746 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 TBR1Q16650 682 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 CPZQ66K79 652 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 PLAG1Q6DJT9 500 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 C19orf48Q6RUI8 117 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 RIPOR1Q6ZS17 1223 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 ST13P4Q8IZP2 240 aaPredicted RBP19.43■□□□□ 0.7
CD44-222ENST00000526025 FAM9CQ8IZT9 166 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 OR4K14Q8NGD5 310 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 CRELD1Q96HD1 420 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 MESP1Q9BRJ9 268 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 SIKE1Q9BRV8 207 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 ING2Q9H160 280 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 HEY2Q9UBP5 337 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 GIMAP2Q9UG22 337 aa19.43■□□□□ 0.7
CD44-222ENST00000526025 ARGFXA6NJG6 315 aa19.42■□□□□ 0.7
CD44-222ENST00000526025 GLOD5A6NK44 160 aa19.42■□□□□ 0.7
CD44-222ENST00000526025 TCP11X1B4DZS4 312 aa19.42■□□□□ 0.7
CD44-222ENST00000526025 SLC35E2P0CK97 266 aa19.42■□□□□ 0.7
CD44-222ENST00000526025 TACR1P25103 407 aa19.42■□□□□ 0.7
CD44-222ENST00000526025 RPL3P39023 403 aaKnown RBP19.42■□□□□ 0.7
CD44-222ENST00000526025 C21orf58P58505 322 aa19.42■□□□□ 0.7
CD44-222ENST00000526025 ACTN3Q08043 901 aaPredicted RBP19.42■□□□□ 0.7
CD44-222ENST00000526025 PAPD4Q6PIY7 484 aaKnown RBP19.42■□□□□ 0.7
CD44-222ENST00000526025 EPGNQ6UW88 154 aa19.42■□□□□ 0.7
CD44-222ENST00000526025 FAM47EQ6ZV65 393 aa19.42■□□□□ 0.7
CD44-222ENST00000526025 MAVSQ7Z434 540 aa19.42■□□□□ 0.7
CD44-222ENST00000526025 DAZLQ92904 295 aaKnown RBP19.42■□□□□ 0.7
CD44-222ENST00000526025 MTERF3Q96E29 417 aa19.42■□□□□ 0.7
CD44-222ENST00000526025 MAPRE3Q9UPY8 281 aa19.42■□□□□ 0.7
CD44-222ENST00000526025 KLHL41O60662 606 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 CEACAM4O75871 244 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 SEC24DO94855 1032 aaPredicted RBP19.41■□□□□ 0.7
CD44-222ENST00000526025 SERPINA7P05543 415 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 COX7A2P14406 83 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 DDX5P17844 614 aaKnown RBP19.41■□□□□ 0.7
CD44-222ENST00000526025 GUCY1A3Q02108 690 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 C2orf80Q0P641 193 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 CEBPEQ15744 281 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 IL23RQ5VWK5 629 aa19.41■□□□□ 0.7
CD44-222ENST00000526025 JMJD6Q6NYC1 403 aaPredicted RBP19.41■□□□□ 0.7
CD44-222ENST00000526025 SPATA19Q7Z5L4 167 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms