RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 HIST1H2ACQ93077 130 aa3.97□□□□□ -1.77
CSDE1-211ENST00000525970 MCHR2Q969V1 340 aa3.97□□□□□ -1.77
CSDE1-211ENST00000525970 POLR1EQ9GZS1 481 aaKnown RBP3.97□□□□□ -1.77
CSDE1-211ENST00000525970 WWP1Q9H0M0 922 aa3.97□□□□□ -1.77
CSDE1-211ENST00000525970 FAM49AQ9H0Q0 323 aaPredicted RBP3.97□□□□□ -1.77
CSDE1-211ENST00000525970 RMND5AQ9H871 391 aa3.97□□□□□ -1.77
CSDE1-211ENST00000525970 UPF2Q9HAU5 1272 aaKnown RBP3.97□□□□□ -1.77
CSDE1-211ENST00000525970 YAE1D1Q9NRH1 226 aa3.97□□□□□ -1.77
CSDE1-211ENST00000525970 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.97□□□□□ -1.77
CSDE1-211ENST00000525970 LHX3Q9UBR4 397 aa3.97□□□□□ -1.77
CSDE1-211ENST00000525970 MRTO4Q9UKD2 239 aaKnown RBP3.97□□□□□ -1.77
CSDE1-211ENST00000525970 POMT2Q9UKY4 750 aa3.97□□□□□ -1.77
CSDE1-211ENST00000525970 FOXJ3Q9UPW0 622 aa3.97□□□□□ -1.77
CSDE1-211ENST00000525970 SH3PXD2BA1X283 911 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 H0YCG3 227 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 E2F3O00716 465 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 KLF11O14901 512 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 TLX2O43763 284 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-211ENST00000525970 EXTL3O43909 919 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 ECE2O60344 883 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 PALMO75781 387 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 FGF19O95750 216 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 EDN1P05305 212 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 FAM157CP0CG43 387 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 PRG2P13727 222 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 AMD1P17707 334 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 DRD5P21918 477 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 CTNNA2P26232 953 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 DLX5P56178 289 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 CSNK2BP67870 215 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 LRRC74AQ0VAA2 488 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 SNTB2Q13425 540 aaKnown RBP3.96□□□□□ -1.78
CSDE1-211ENST00000525970 GPM6BQ13491 265 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 RFTN1Q14699 578 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-211ENST00000525970 TMEM132DQ14C87 1099 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 C3AR1Q16581 482 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 NADK2Q4G0N4 442 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 FGD3Q5JSP0 725 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 SPANXN4Q5MJ08 99 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 CDC42EP5Q6NZY7 148 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 RBMS3Q6XE24 437 aaKnown RBP3.96□□□□□ -1.78
CSDE1-211ENST00000525970 C9orf139Q6ZV77 190 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 ITIH5Q86UX2 942 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 VASH2Q86V25 355 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 DND1Q8IYX4 353 aaKnown RBP3.96□□□□□ -1.78
CSDE1-211ENST00000525970 CCDC197Q8NCU1 140 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 GPR148Q8TDV2 347 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 GATAD1Q8WUU5 269 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 ZNRF4Q8WWF5 429 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 SHC3Q92529 594 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 TMEM143Q96AN5 459 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 IWS1Q96ST2 819 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 IL12RB2Q99665 862 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 TDRD1Q9BXT4 1180 aaKnown RBP3.96□□□□□ -1.78
CSDE1-211ENST00000525970 CXXC4Q9H2H0 198 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 PALMDQ9NP74 551 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 MAN2C1Q9NTJ4 1040 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.96□□□□□ -1.78
CSDE1-211ENST00000525970 DBF4Q9UBU7 674 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-211ENST00000525970 WDR37Q9Y2I8 494 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 KLHDC2Q9Y2U9 406 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 RNF115Q9Y4L5 304 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 MAB21L2Q9Y586 359 aa3.96□□□□□ -1.78
CSDE1-211ENST00000525970 TCF20Q9UGU0 1960 aaKnown RBP3.95□□□□□ -1.78
CSDE1-211ENST00000525970 GLTPD2A6NH11 291 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 SHISA7A6NL88 538 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 YJEFN3A6XGL0 299 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 ANKRD30BLA7E2S9 258 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 ANHXE9PGG2 379 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 E9PMD0 336 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 SGK494L7N484 410 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 LRCH4O75427 683 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 KHDRBS3O75525 346 aaKnown RBP3.95□□□□□ -1.78
CSDE1-211ENST00000525970 ZNF821O75541 412 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-211ENST00000525970 NDUFA7O95182 113 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 HPRP00739 348 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 CALCBP10092 127 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 RRASP10301 218 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 SLC2A2P11168 524 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-211ENST00000525970 AADACP22760 399 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 DPP4P27487 766 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 PTPN6P29350 595 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 OTX2P32243 289 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 PTGER3P43115 390 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 METAP1P53582 386 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 BACE1P56817 501 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 CDR2Q01850 454 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 ZRSR1Q15695 479 aaKnown RBP3.95□□□□□ -1.78
CSDE1-211ENST00000525970 ZKSCAN8Q15776 578 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-211ENST00000525970 MAJINQ3KP22 176 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 LRIT3Q3SXY7 679 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 FAM106AQ4KMX7 169 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 SLC39A4Q6P5W5 647 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 ZNF790Q6PG37 636 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 GDPD4Q6W3E5 623 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 RFPL4BQ6ZWI9 263 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 TRPT1Q86TN4 253 aaKnown RBP3.95□□□□□ -1.78
CSDE1-211ENST00000525970 CENPLQ8N0S6 344 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-211ENST00000525970 GCNT2Q8N0V5 402 aa3.95□□□□□ -1.78
CSDE1-211ENST00000525970 PARP8Q8N3A8 854 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms