RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 CLDN20P56880 219 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 DSTNP60981 165 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 RRAS2P62070 204 aaPredicted RBP9.78□□□□□ -0.84
SPIDR-225ENST00000524141 MRPL28Q13084 256 aaKnown RBP9.78□□□□□ -0.84
SPIDR-225ENST00000524141 NAE1Q13564 534 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 ARHGEF6Q15052 776 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 ESCO2Q56NI9 601 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 C3orf38Q5JPI3 329 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 RTP2Q5QGT7 225 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 MED27Q6P2C8 311 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 FAM26EQ8N5C1 309 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 TCEANCQ8N8B7 351 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.78□□□□□ -0.841e-6■■■■□ 23.9
SPIDR-225ENST00000524141 MARVELD3Q96A59 401 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 PKP4Q99569 1192 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 KATNB1Q9BVA0 655 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 PRRG3Q9BZD7 231 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 ISYNA1Q9NPH2 558 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 ACSL6Q9UKU0 697 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 SPIN1Q9Y657 262 aaPredicted RBP9.78□□□□□ -0.84
SPIDR-225ENST00000524141 NINQ8N4C6 2090 aa9.78□□□□□ -0.84
SPIDR-225ENST00000524141 LYRM1O43325 122 aa9.77□□□□□ -0.84
SPIDR-225ENST00000524141 SGTAO43765 313 aa9.77□□□□□ -0.84
SPIDR-225ENST00000524141 PSIP1O75475 530 aaKnown RBP9.77□□□□□ -0.84
SPIDR-225ENST00000524141 ZNF30P17039 623 aa9.77□□□□□ -0.84
SPIDR-225ENST00000524141 ELAVL4P26378 380 aaKnown RBP9.77□□□□□ -0.84
SPIDR-225ENST00000524141 SOAT1P35610 550 aa9.77□□□□□ -0.84
SPIDR-225ENST00000524141 RPS13P62277 151 aaKnown RBP9.77□□□□□ -0.84
SPIDR-225ENST00000524141 WSCD2Q2TBF2 565 aa9.77□□□□□ -0.84
SPIDR-225ENST00000524141 KLHL22Q53GT1 634 aa9.77□□□□□ -0.84
SPIDR-225ENST00000524141 SPERTQ8NA61 448 aa9.77□□□□□ -0.84
SPIDR-225ENST00000524141 NLGN4YQ8NFZ3 816 aaPredicted RBP9.77□□□□□ -0.84
SPIDR-225ENST00000524141 TMEM163Q8TC26 289 aa9.77□□□□□ -0.84
SPIDR-225ENST00000524141 AP2M1Q96CW1 435 aa9.77□□□□□ -0.84
SPIDR-225ENST00000524141 HYLS1Q96M11 299 aa9.77□□□□□ -0.84
SPIDR-225ENST00000524141 MARVELD1Q9BSK0 173 aa9.77□□□□□ -0.84
SPIDR-225ENST00000524141 ZNF717Q9BY31 904 aaPredicted RBP9.77□□□□□ -0.84
SPIDR-225ENST00000524141 POLDIP3Q9BY77 421 aaKnown RBP9.77□□□□□ -0.84
SPIDR-225ENST00000524141 B3GNT2Q9NY97 397 aa9.77□□□□□ -0.84
SPIDR-225ENST00000524141 STOX2Q9P2F5 926 aaPredicted RBP9.77□□□□□ -0.84
SPIDR-225ENST00000524141 TEKT2Q9UIF3 430 aa9.77□□□□□ -0.84
SPIDR-225ENST00000524141 SNTNA6NMZ2 147 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 C5orf58C9J3I9 102 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 FAM227AF5H4B4 570 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 FFAR1O14842 300 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 SHOXO15266 292 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 SH3BGRLO75368 114 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 SLCO2B1O94956 709 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 RECKO95980 971 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 CATP04040 527 aaKnown RBP9.77□□□□□ -0.85
SPIDR-225ENST00000524141 H1F0P07305 194 aaKnown RBP9.77□□□□□ -0.85
SPIDR-225ENST00000524141 ASGR1P07306 291 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 CLEC2LP0C7M8 214 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 FGF9P31371 208 aaPredicted RBP9.77□□□□□ -0.85
SPIDR-225ENST00000524141 CA8P35219 290 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 MAPK9P45984 424 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 INPP1P49441 399 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 DGKGP49619 791 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 DGKEP52429 567 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 LIM2P55344 173 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 ALDH6A1Q02252 535 aaKnown RBP9.77□□□□□ -0.85
SPIDR-225ENST00000524141 PTSQ03393 145 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 RIN1Q13671 783 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 SF3A2Q15428 464 aaKnown RBP9.77□□□□□ -0.85
SPIDR-225ENST00000524141 NDUFA9Q16795 377 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 TRIM71Q2Q1W2 868 aaKnown RBP9.77□□□□□ -0.85
SPIDR-225ENST00000524141 ATAT1Q5SQI0 421 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 IDO2Q6ZQW0 420 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 QSOX2Q6ZRP7 698 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 PDZD3Q86UT5 571 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 UBE2J2Q8N2K1 259 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 OR2AP1Q8NGE2 309 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 OR52I1Q8NGK6 324 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 OR5AK3PQ8NH89 298 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 APOBEC4Q8WW27 367 aaKnown RBP9.77□□□□□ -0.85
SPIDR-225ENST00000524141 WBP2Q969T9 261 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 C1GALT1C1Q96EU7 318 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 SOSTQ9BQB4 213 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 PPP1R3EQ9H7J1 279 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 MYNNQ9NPC7 610 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 MRPL39Q9NYK5 338 aaKnown RBP9.77□□□□□ -0.85
SPIDR-225ENST00000524141 TMPRSS11EQ9UL52 423 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 PPIL1Q9Y3C6 166 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 HSPB11Q9Y547 144 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 KCNE2Q9Y6J6 123 aa9.77□□□□□ -0.85
SPIDR-225ENST00000524141 TMEM129A0AVI4 362 aa9.76□□□□□ -0.85
SPIDR-225ENST00000524141 PRR23AA6NEV1 266 aa9.76□□□□□ -0.85
SPIDR-225ENST00000524141 HEPACAM2A8MVW5 462 aa9.76□□□□□ -0.85
SPIDR-225ENST00000524141 ARHGEF33A8MVX0 844 aa9.76□□□□□ -0.85
SPIDR-225ENST00000524141 FOXE1O00358 373 aaPredicted RBP9.76□□□□□ -0.85
SPIDR-225ENST00000524141 QSOX1O00391 747 aa9.76□□□□□ -0.85
SPIDR-225ENST00000524141 PITPNM1O00562 1244 aa9.76□□□□□ -0.85
SPIDR-225ENST00000524141 ACADMP11310 421 aa9.76□□□□□ -0.85
SPIDR-225ENST00000524141 CFL1P23528 166 aaKnown RBP9.76□□□□□ -0.85
SPIDR-225ENST00000524141 HLA-FP30511 346 aa9.76□□□□□ -0.85
SPIDR-225ENST00000524141 SSTR4P31391 388 aa9.76□□□□□ -0.85
SPIDR-225ENST00000524141 GABRA5P31644 462 aa9.76□□□□□ -0.85
SPIDR-225ENST00000524141 MAN2A2P49641 1150 aa9.76□□□□□ -0.85
SPIDR-225ENST00000524141 FOXD4Q12950 439 aaPredicted RBP9.76□□□□□ -0.85
SPIDR-225ENST00000524141 TPBGQ13641 420 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms